Gene Information

Name : VCD_000676 (VCD_000676)
Accession : YP_002876432.1
Strain :
Genome accession: NC_012667
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3176
EC number : -
Position : 777402 - 779219 bp
Length : 1818 bp
Strand : +
Note : hemolysin

DNA sequence :
GTGGGAAAAAGATCGGGCGCATCATATCGCTCAAGGCGACCAAAATTGGCCTGCGCTGATTGGGACAAGCGAATGATGCA
AACCCAGCCATTTCGATTGCCGCGCTTCACCCCATTTGGGGTGATAGAAAAGGGGGTAGAGTTAGCGACAGGGCTTAGTC
AGCTAGAGCGCTATTACCAACAAAGGCCAACCACGCGTGATGGTTTTGAGTTTATGCGTTACACCCTTGAAGCGCTCAAT
GTGCATTACCAAGTGGATAGAGGCCGCGTTGAACAGATCCCCGCGCAAGGGCCTGTGGTGATTGTGGCCAATCATCCGCT
TGGTGCCATTGAAGGGGTGATTTTGGCCGATTTGGTTGGGCAAGTACGCAAAGATGTCAAAGTGCTCGCTAATCAACTGC
TTAAACGCTTACCTGAAATTGAACCTCTGTTCATTGGTGTGGATGTGTTTAATGGCGCGCAGGCGAGTAAAACCAATGCA
CGAGGTATTCGAGAAGCACACCGACATTTAGCGGAAGGTGGCGTACTGATCGTATTTCCCGCCGGTGAAGTTTCGACACC
GCAAAAAGAAACCGGACAGTTGAGTGATATTGACTGGAGTCAATCCGTTGCGAAATTCATTCAGCGTAGCCAAGCGAGGT
GCGTGCCGATTTATATTCATGGTCGTAACAGCGCGTGGTTTTATCGCGCTGGAAAAATTCATCCGCTCTTGCGCACCGCC
ATGTTAGGTCGAGAGCTTTTGAATAAAAGCGCGAGTACCATTTCCCTTTGCATTGGTCAGCCGATTCCTTATGCGGAATT
AAAAGAGTTCACCAAAGATGAAGATGTGGTCAATTACTTGCGGCTCAATACCTATTTGATGAGCCCGCATGGCCAAGTTG
AATCGGCAAAAGTCTCTTTTACGATTCCGGTAATTGATCCTGTACCTAAAGCAGCTCTCATCGCAGAGCTTGCTCAATTA
GATAAGCAAGCCAAGTTATTGGAGCAGGGCGAATTCACCGTGTACTGCGTACCTTCAACCCACATTCCACTCATGATGCA
AGAAATTGGTCGTGTGCGTGAAATCAGTTTCCGCGCGGTGGGGGAAGGCAGCGGGCAGGCTTGCGATGTCGATGCGTATG
ATCACCATTATTGGCAGCTCTTTGTTTGGAATCGAGAGCAGAGCGAGCTGGTTGGTGCGTATCGCATGGGCTTGGTCGAT
AAAATTGTCGCAGAAAGAGGGCTGCAAGGCCTCTATTCCCGTAGCTTGTTTCATTACGATCACGCTTTCTTGGCGACCTT
AGAGAATGCGATTGAGCTTGGTCGCTCAGTGGTGGCTGAACAGTATCAACGTAATCTCAACTCATTGCTTTTACTCTGGA
AAGGCATTGCGCGTTTCGTAGAATTGAACCCACATTACACCCATTTGTTTGGCCCGGTCAGCATCAGCAATGATTACAGC
CCAGCAGCTCGACAACTGATGGCTGCGACCTTATCCATCCATCACTATGATCAACATAAAGCGGCTTTGGTCAGTCCATC
AACCCCTTTGCGTGCCGGAACAGAAGTGTTTTGGCAAAAGAGCTTGCTATCGGCACTCGCCAGTGTCTCTTTGCTCTCAA
AAGTAGTTGCGCGGATGGAGCAGGGCAACGGGCTGCCTGTGTTGCTGCGCCAGTATCTCGGTATGAATGGCAAGTTGGTC
TGTTTGAACGTTGATCCTGCTTTTAACGATGCGTTAGATGGCTTGATTGTGGTGAATTTGAAGCAAGTACCACTGAAAAC
GTTGGCTAAATACATGGGTAAAGAGGCTGCGCAGCATTACCTTTGCTCAGTGACGTAG

Protein sequence :
MGKRSGASYRSRRPKLACADWDKRMMQTQPFRLPRFTPFGVIEKGVELATGLSQLERYYQQRPTTRDGFEFMRYTLEALN
VHYQVDRGRVEQIPAQGPVVIVANHPLGAIEGVILADLVGQVRKDVKVLANQLLKRLPEIEPLFIGVDVFNGAQASKTNA
RGIREAHRHLAEGGVLIVFPAGEVSTPQKETGQLSDIDWSQSVAKFIQRSQARCVPIYIHGRNSAWFYRAGKIHPLLRTA
MLGRELLNKSASTISLCIGQPIPYAELKEFTKDEDVVNYLRLNTYLMSPHGQVESAKVSFTIPVIDPVPKAALIAELAQL
DKQAKLLEQGEFTVYCVPSTHIPLMMQEIGRVREISFRAVGEGSGQACDVDAYDHHYWQLFVWNREQSELVGAYRMGLVD
KIVAERGLQGLYSRSLFHYDHAFLATLENAIELGRSVVAEQYQRNLNSLLLLWKGIARFVELNPHYTHLFGPVSISNDYS
PAARQLMAATLSIHHYDQHKAALVSPSTPLRAGTEVFWQKSLLSALASVSLLSKVVARMEQGNGLPVLLRQYLGMNGKLV
CLNVDPAFNDALDGLIVVNLKQVPLKTLAKYMGKEAAQHYLCSVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0489 NP_230143.1 hemolysin Not tested VSP-2 Protein 1e-157 55