Gene Information

Name : VCD_000542 (VCD_000542)
Accession : YP_002876300.1
Strain :
Genome accession: NC_012667
Putative virulence/resistance : Virulence
Product : UDP-glucose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 622453 - 623619 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTGCCATTGCAGGAACGGGGTATGTAGGATTATCGAATGGAATACTGCTTGCTCAACACAATGAAGTGGTCGC
ATTGGATATCGTGGTCAGCCGAGTAGAGCAGCTCAATGATAAGATTTCACCGATCGCCGATCCCGAGATTGAATCTTTTC
TACAGCATCAACCCCTTAATTTTCGAGCGACTTGCGATAAACGAGACGCCTACCAAGACGCACAGTTTGTCGTGATCGCC
ACGCCTACCGACTATGACCCACAAACCAATCATTTTGATACACGAACCGTGGAAGCGGTGATTGATGATGTGTTGGCGAT
CAATCCACAGGCCATCATGGTGATTAAATCCACTGTGCCTGTGGGTTACACCAAACGCATCAAACAACGGCTCTGCTGTA
ACAACCTGATCTTTTCGCCAGAGTTTTTACGCGAAGGGCGTGCCTTGTATGACAACTTATACCCATCTCGGATCATTGTT
GGGGAAAAGTCGGAGCGCGGCCAAGCGTTTGCAACCTTGTTGGCTCAGGGGGCAAAGAAAATGGATATTCCGATTTTGTT
GACTCACTCGACCGAAGCTGAAGCGGTCAAGCTTTTCTCGAACACTTATCTTGCAATGCGTGTATCGTTTTTTAATGAGT
TGGATACGTACGCGGAAACCCATGGGTTAGACACCAAACAGATCATCGAAGGCGTTGGGTTAGATCCTCGCATCGGTAAT
CATTACAACAATCCTTCTTTTGGTTATGGTGGTTACTGCTTGCCGAAAGACACTCGCCAGTTACTGCGCAATTTTGAGGA
TGTACCTAATAACCTGATCCGTGCGATTGTCGATGCCAATACCACGCGCAAAGACCATATTGCGTTTTCCATCTTGAACC
GCAACCCGAAAGTGGTTGGTATTTACCGCTTAATCATGAAGTCGGGCTCTGACAATTTTCGAGCTTCATCCATCTTAGGC
ATCATGAAACGAATCAAGGCACAGGGGGTTGAAGTGGTGATTTACGAACCTGTGCTCAATGAATCGACCTTTTACGGCTC
ACCTGTGATTCGCGATCTTGCCCAGTTTAAAGCGATGGCCGAGGTGATAGTGACCAATCGCCGGGTGGCTGAGCTGGAGG
ATGTCGCGGAAAAAATCTACACCCGTGACCTGTTTGGTCAGGATTGA

Protein sequence : 
MKIAIAGTGYVGLSNGILLAQHNEVVALDIVVSRVEQLNDKISPIADPEIESFLQHQPLNFRATCDKRDAYQDAQFVVIA
TPTDYDPQTNHFDTRTVEAVIDDVLAINPQAIMVIKSTVPVGYTKRIKQRLCCNNLIFSPEFLREGRALYDNLYPSRIIV
GEKSERGQAFATLLAQGAKKMDIPILLTHSTEAEAVKLFSNTYLAMRVSFFNELDTYAETHGLDTKQIIEGVGLDPRIGN
HYNNPSFGYGGYCLPKDTRQLLRNFEDVPNNLIRAIVDANTTRKDHIAFSILNRNPKVVGIYRLIMKSGSDNFRASSILG
IMKRIKAQGVEVVIYEPVLNESTFYGSPVIRDLAQFKAMAEVIVTNRRVAELEDVAEKIYTRDLFGQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 6e-90 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_000542 YP_002876300.1 UDP-glucose dehydrogenase VFG0963 Protein 3e-97 52