Gene Information

Name : VCD_000474 (VCD_000474)
Accession : YP_002876232.1
Strain :
Genome accession: NC_012667
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 538684 - 539454 bp
Length : 771 bp
Strand : +
Note : -

DNA sequence : 
TTGGCTAGAAGCCATGCAGCAAGCGGATGCGCAACATCCAGATACCCAGCAAGCTCAAGCCTTGCTGAGCCAAGGGTAGG
AGGACGCATGCTGCATTTTCAAAGTATAGAAAAACAGTACTCATTGGGAGTTCAAAGCGTGCCAGCGCTACGTGGTGTGA
GCGGTGTGGTACAGCAAGGCGAGATGTTAGCGCTGTGTGGCCCCTCCGGCTCGGGTAAAAGCACTTTGCTCAACATCTTG
GGATTACTTGACCCTAATTACCAAGGTGAAGTGGCATTAGAGGGACGTGTATATCCACGTAAGGGTAAGTCTGCCGCCTT
ACTGCGTCGTACTCAGTTTGGTTTTGTGTTCCAAAAATTCAACTTAGTATCCGTGATGACGGCGCTAGAGAATGTCGCCT
ATCCCTTGATGCTTAATGGTTTTAGCCGTCGTGATCAGCACAAGTTAGCACATGACATGCTAACCAAGGTTGGATTAGAA
GCGGTGATGCAGCAGCGTCCAGATCATCTTTCCGGTGGTCAGCAGCAGCGTGTAGCGATAGCTCGGGCGTTGGTTCACAA
CCCGAAATTGGTGGTCGCGGATGAGCCTACCGCGAGTCTGGATAGTCAAACAGCCAACCTCGTGATCAGTTTAATGAAAA
GTCTTGGTCATGAGTTAGGCACGACTTTTGTGGTTGCCACTCATGACGGGCGCATGGCAGCTCAGTGCGATCGCACCCTC
AATCTGGTGGACGGACAAATTTCATTGGAGGCGATGCAATGGGCAAGTTGA

Protein sequence : 
MARSHAASGCATSRYPASSSLAEPRVGGRMLHFQSIEKQYSLGVQSVPALRGVSGVVQQGEMLALCGPSGSGKSTLLNIL
GLLDPNYQGEVALEGRVYPRKGKSAALLRRTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHKLAHDMLTKVGLE
AVMQQRPDHLSGGQQQRVAIARALVHNPKLVVADEPTASLDSQTANLVISLMKSLGHELGTTFVVATHDGRMAAQCDRTL
NLVDGQISLEAMQWAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_000474 YP_002876232.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-32 47
VCD_000474 YP_002876232.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-34 43