Gene Information

Name : VCD_000238 (VCD_000238)
Accession : YP_002876002.1
Strain :
Genome accession: NC_012667
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 283583 - 284326 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence : 
ATGCACCCGCAAGACCGAAACGAGAAATTGCGGATGCGGGACGTCAGGAAGAGATTGCGCACTTATTGGAGAGCATCAAG
TAACCTTATGCGTTTACTATTAGTTGAAGATGACACGTTGCTCGGTGAATCAATGCAAGTAGCGTTAAGCCGACAAGGCT
ATACGGTTGACTGGCTGGAGCGGGGTGGTGGCGTCGTGACCGCCCTGAAAACCGAGCAATTTACGGCACTGATTTTGGAC
CTCACCTTGCCAGATATGGATGGCTTGGAAGTCCTGCGCCAAATTCGGCGAGCGGGTTATACATTGCCTGTCATGATACT
CACGGCACGGGATGATATCAGTGATCGGGTCAAAGGGTTGGATGGCGGTGCAGATGAGTACATAGGTAAGCCGTTTGCGC
TCGAAGAGCTGCTCGCACGTTTACGCTTGATCATTCGTCGTAGCTCAGGGAGCGCAGAGGAGCTCATCTCCGTTGGGGAA
CTTGACCTTTCGCTCTCTAAACAAGAAATCTACTACGCTCAGCAAGCTCTGAAATTAACGCGAAATGAGTACAAAATCCT
CGCCAGTTTGATGACCCAAGCGGGAAGAGTGATGAGTAAAGAGCTTTTGCAGCAAGCACTGCACGGCTGGGATGAAGGCA
GCAGTGATAACGCAATCGAAGTACATATTCATAATCTGCGCAAAAAATTGCCGGATAATCTGGTTAAAAATGTACGAGGT
GTGGGGTACATGATTGAAAAATAA

Protein sequence : 
MHPQDRNEKLRMRDVRKRLRTYWRASSNLMRLLLVEDDTLLGESMQVALSRQGYTVDWLERGGGVVTALKTEQFTALILD
LTLPDMDGLEVLRQIRRAGYTLPVMILTARDDISDRVKGLDGGADEYIGKPFALEELLARLRLIIRRSSGSAEELISVGE
LDLSLSKQEIYYAQQALKLTRNEYKILASLMTQAGRVMSKELLQQALHGWDEGSSDNAIEVHIHNLRKKLPDNLVKNVRG
VGYMIEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_000238 YP_002876002.1 DNA-binding response regulator BAC0487 Protein 9e-36 45
VCD_000238 YP_002876002.1 DNA-binding response regulator BAC0083 Protein 1e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_000238 YP_002876002.1 DNA-binding response regulator VFG0473 Protein 5e-38 45