Gene Information

Name : VCD_000013 (VCD_000013)
Accession : YP_002875779.1
Strain :
Genome accession: NC_012667
Putative virulence/resistance : Unknown
Product : L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : -
Position : 11068 - 11952 bp
Length : 885 bp
Strand : +
Note : L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate

DNA sequence :
ATGTATCAACATTTACTGCGCCACCGCGTTGGCTTGTATGAAAAAGCGCTGCCCAATCACTTAAGTTGGGAGGAAAAACT
GGCCTGCACCAAAGAGCTCGGCTTCGATTTTCTGGAGATCTCGGTGGATGAAAGTGACGAGCGCCGCAGCCGCCTCGATT
GGGATGATGCCACCATTTATTCATTGCACCGCCTTTGTGAGGAGTATGGCGTGCCGCTGCAATCGATGTGCCTTAGCGCT
CATCGCAAGTTTCCGTTTGGCTCGGCCGATCCCGCGCTGCGCGATGAGGCGCTGAAAATTATGCAAAAGGCGATAACCCT
CGCCTACAAACTGGGTATTCGCACCATCCAATTGGCGGGGTATGACGTCTATTACGAGCCCGCCAACTCAGCCACTCATC
AGCGTTTTATTGAGGGTATGCAACACGCCGCCCGTTTAGCTGAGCGCGCTGGCGTGATGTTAGCCGTTGAGATCATGGAT
ACCCCTTATCTCAATGCGCTGAGTAAATTTGAAGTGCTGAATCGGCAGATCCAATCGCCCTTTTTTACGGCGTATCCAGA
CGTTGGCAACATCTCAGGCTGGAATTATGACTTGCTGACCGAACTCTCGTTAAGCAAGCCCCACATCACTCAGATCCACC
TCAAGGACACTTACAAGGTGAGCGAACAGTACGCCGGACAGTTTCGTGATTTAGTGATTGGCGAAGGCGACGTCGACTTT
GATGAACTGTTCTGCCGCTTAAAAGCGCTGGATTGCGTGGTGCCGTTAGTGATTGAAATGTGGGCGCACGATGAACAGTG
GCAACAGCATATTCACACCGCGCAGCGTCGATTAAACCAAGCTTGTGATCGCGCCGAACTCCCTCGCTTGTTCCCTCATC
TTTAA

Protein sequence :
MYQHLLRHRVGLYEKALPNHLSWEEKLACTKELGFDFLEISVDESDERRSRLDWDDATIYSLHRLCEEYGVPLQSMCLSA
HRKFPFGSADPALRDEALKIMQKAITLAYKLGIRTIQLAGYDVYYEPANSATHQRFIEGMQHAARLAERAGVMLAVEIMD
TPYLNALSKFEVLNRQIQSPFFTAYPDVGNISGWNYDLLTELSLSKPHITQIHLKDTYKVSEQYAGQFRDLVIGEGDVDF
DELFCRLKALDCVVPLVIEMWAHDEQWQQHIHTAQRRLNQACDRAELPRLFPHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 4e-58 46