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Name : rscJ (PFLU0726) Accession : YP_002870391.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Virulence Product : putative type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 827789 - 828604 bp Length : 816 bp Strand : - Note : - DNA sequence : ATGCAACCTGCAGTAGCGAACAGGTACTTCCTGCAGCCAACGCTATTGGCGCTCACCCTTCTGTTTCTGTTGAGTGGTTG CGGTGACCGTGTCGAACTGCATCGACAACTTTCCGAGCAAGAGGCCAATGAAGTCATTGCAGAACTGGCAGACAAGCATA TTCGAGCTCGAAAGATCCCGACCAAGGATGGTGTAACGGTAAGTGTTGATACAAACGACATAGGCCGAGCTGTTCGCACG CTGGAGGCTGTGGGCCTGCCCAAACTCGCTCGCGCCACACTCGGCGATACGTTTCGCAAAGAGGGCGTTATCTCTACGCC ACTGGAAGAGCGCGCGCGCTACATCTACGCCTTATCCCAAGAGCTCGAAGCCACCCTGTCGAACATCGACGGTGTCATCG TTGCCCGAGTGCACGTCGTGCTTCCCGAGCGCATTGCGCCAGGAGAACCTGTGCAGCCTGCATCCGCCTCGGTTTTCATC AAACACGATCCTCGCCTTGATCCCGATAATATCCGAGCCCGGGTTCGCAGAATGGTCGCAAGCAGTATTCCGGGGATGAC CACCGCTGTGGATAATCCACAAAAACTTACCGTCATATTTGTACCCGCCGTGGCTTACCAGGAACAAAAGCGATTGGTCT ACTTCGGACCTTTCTTAATCCCGGCAGATGACCGCAGCTTTTGGTGGACCTGCTTGGTCGGTGTGCTGGGTGGTTTGATT TTTACGGTGGCCGGCTCACTCTTCCTGTTGAACCGGCGACAGCGGCTGGCGCAGGCGATACCTGAGGTAACGACAGGTCC TGTACATGATCATTAG Protein sequence : MQPAVANRYFLQPTLLALTLLFLLSGCGDRVELHRQLSEQEANEVIAELADKHIRARKIPTKDGVTVSVDTNDIGRAVRT LEAVGLPKLARATLGDTFRKEGVISTPLEERARYIYALSQELEATLSNIDGVIVARVHVVLPERIAPGEPVQPASASVFI KHDPRLDPDNIRARVRRMVASSIPGMTTAVDNPQKLTVIFVPAVAYQEQKRLVYFGPFLIPADDRSFWWTCLVGVLGGLI FTVAGSLFLLNRRQRLAQAIPEVTTGPVHDH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcJ | AAT96359.1 | HrcJ | Virulence | S-PAI | Protein | 3e-58 | 68 |
| hrcJ | AAT96279.1 | HrcJ | Virulence | S-PAI | Protein | 3e-58 | 68 |
| hrcJ | AAT96320.1 | HrcJ | Virulence | S-PAI | Protein | 3e-58 | 68 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 9e-64 | 66 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 2e-61 | 65 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 2e-61 | 65 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 1e-62 | 64 |
| hrcJ | ABA47308.1 | HrcJ | Virulence | S-PAI | Protein | 2e-60 | 62 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 4e-62 | 59 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 5e-62 | 59 |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 9e-60 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rscJ | YP_002870391.1 | putative type III secretion protein | VFG0409 | Protein | 1e-24 | 41 |
