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Name : rscS (PFLU0716) Accession : YP_002870381.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Virulence Product : putative type III secretion membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 821052 - 821315 bp Length : 264 bp Strand : + Note : - DNA sequence : ATGGAACCAATCGTACTGTTCAAGCAGGGCATGTTGCTGGTGGTGGTGCTGTCGGCACCGCCTTTGTTGGTGGCGGTGGT GGTAGGCGTGATGACGTCGCTGGTCCAGGCACTGATGCAGGTGCAGGACCAGACGCTACCCTTCGGCATCAAGCTGGTGG CGGTGGGGATCACACTGATCATGACCGGCCGCTGGATAGGCGTGGAGTTGATCCAACTGATCAACCTGACCTTTGACATG ATCGGCCGCTCGGCCCTGAACTGA Protein sequence : MEPIVLFKQGMLLVVVLSAPPLLVAVVVGVMTSLVQALMQVQDQTLPFGIKLVAVGITLIMTGRWIGVELIQLINLTFDM IGRSALN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 4e-16 | 77 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 5e-16 | 77 |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 9e-16 | 75 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 9e-16 | 75 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 3e-16 | 75 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 3e-16 | 75 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 1e-14 | 72 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 8e-14 | 72 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 8e-14 | 72 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 8e-14 | 72 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 5e-12 | 68 |
