Gene Information

Name : PFLU6015 (PFLU6015)
Accession : YP_002875499.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 6575289 - 6576623 bp
Length : 1335 bp
Strand : -
Note : -

DNA sequence :
ATGTCCTGGAACAATCGCGTGGTCTGGTCGGAAGGCATGTTCATCGGAACGCAGCACTTCCAGCAGCATGACCGTTACCT
GGAAAACCTGATCGACGCCCGCAGCCGCCCGTTGTCCGCCGGCGCCTGGGGGTTTTCCGAGCTGCTGATCGACCAGGGCC
TGCTGGCCCAGGGCAAGCTGGCGATCGTATCGGCGCGCGGCCTGCTGCCGGACGGTACGCCGTTCAACATCCCCCAGGAC
GACCTGGCACCGAGCCCGTTGAATATTGACGACAACCTGCGCGACGGCCTGGTGTACCTGGCGCTGCCGCTCAAGCGTGC
CGGCGCCCGCGATACCGTGGATGAAGGCGAAGCCCTGGAAGCGGCGCGTTACGTGAGCCAGGTCCGCGAAGTGCGCGACG
ACAACGCCCCGTTCGAAAATCGCGCCCCGGTGGCCGTGGGTTCCCGCGCCCTACGTCTGCTGACTGCCCAGGATGGCATC
AGCGATTACGCCGCCGTGGGCTTGGTGCGCATCAAGGAAAAGCGCGCCGACCGTGCGCTGGTGCTCGACGACACTTACAT
TCCGCCGGTGCTGGACGTCGCCGCGAGCAAGCCGCTGACGGCGTTTCGCAGTGAACTGCTCGGCCTGCTGCACCAGCGCG
GCGAGGCCTTGGCTGGCCGCGTAGTTGCCTCGGGCGCCGGTGGCGCGTCGGAGATTGCCGACTTCATGCTGCTGCAACTG
GTCAACCGTGCCCAACCGCTGATCCAGCATTTGAGCCAGTTGAGCCCGCTGCACCCGGAGCGTTTCTTCAGTGAGTTGGT
CAGCCTGGCCGGCGAGTTCTCGACCTTCTCCACCTCGGGCCGTCGCCCGCAGGAATACCCGCAGTACCAGCACGACGACT
TGGCCCTGAGCTTTGCCCCGGTGATGGCGGCGTTGCGTGAAGCGCTGTCGATGCTGATCGACAGCAAGGCCACGCCGATC
CCGATTGTCGAGAAAGCCTACGGCGTGCACGTGGCGATGCTGGCCGACAAGACCCTGCTCGACAACGCCAGCTTCATCCT
CGTGGTGCGGGCCGACGTGCCCGGTGAAACCCTGCGTGCGCGCTTCGGCCAGCAGAGCAAAGTCGGCTCGGTGGAGCACA
TCCGCGACCTGGTCAACCTGCAACTGCCGGGCATCAGCCTGTTGCCTCTGCCGGTGGCGCCACGCCAACTGCCGTACCAC
GCCGGCTCGACCTATTACGAGCTGGATCGCGGCAGCGAGGCCTGGCAACAGTTGGGCAACTCCGGCGGTTTTGCCTTCCA
TATCGCCGGGCAGTTCCCGGGCTTGAACCTGGCCTTCTGGGCGATCCGAGGATAA

Protein sequence :
MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKLAIVSARGLLPDGTPFNIPQD
DLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVDEGEALEAARYVSQVREVRDDNAPFENRAPVAVGSRALRLLTAQDGI
SDYAAVGLVRIKEKRADRALVLDDTYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHLSQLSPLHPERFFSELVSLAGEFSTFSTSGRRPQEYPQYQHDDLALSFAPVMAALREALSMLIDSKATPI
PIVEKAYGVHVAMLADKTLLDNASFILVVRADVPGETLRARFGQQSKVGSVEHIRDLVNLQLPGISLLPLPVAPRQLPYH
AGSTYYELDRGSEAWQQLGNSGGFAFHIAGQFPGLNLAFWAIRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-76 42
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 3e-76 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU6015 YP_002875499.1 hypothetical protein VFG2065 Protein 1e-166 76
PFLU6015 YP_002875499.1 hypothetical protein VFG2082 Protein 4e-94 45