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Name : radC (PFLU5982) Accession : YP_002875467.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Virulence Product : DNA repair protein RadC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2003 EC number : - Position : 6539567 - 6540241 bp Length : 675 bp Strand : - Note : Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase DNA sequence : ATGAGTATTCGCGATTGGCCGGCGGCGGAGCGGCCGCGAGAAAAGCTGTTGGAATGGGGCGCGGCGAGTCTGTCGGATGC CGAGCTGCTGGCGATCTTCTTGCGTACAGGGGTTTCCGGCAGGAGCGCAGTGGACCTGGCGCGCCATCTGTTGGCGCAAT TCGGCGGCTTGCGCCCGTTGTTGGAGGCCAGTCAGGCACTGTTCAACCAACAATTGGGCTTGGGGCCGGCGAAGTTTGCC CAGTTGCAGGCGGTACTGGAAATGGCCAAGCGGCACATGGCCGAACGCCTGCGACATGACTCGGTGCTGGAGAGCCCGAA GGCCGTGCGCGATTACCTCAAGGCCATGCTGCGGCATGAGCCCCACGAGATCTTCGGCTGTCTGTTCCTTGATTCAAGGC ACAGGGTGCTCGGTTTCGAGGCCTTGTCCCAAGGCACCATCGACGCGGCGATGGTTTATCCCCGGCAGGTGGTCAAGCGC GCCCTGGCCTATAACGCGGCGGCGCTGATCCTTTGCCATAACCATCCTTCCGGCAGCCTTGAGCCGAGCGCAGCTGATCG AAAATTGACCAAGTTGCTGCAAAAGGCCTTGGAAGTGGTGGATGTGCGAGTCCTCGATCACATCATCGTAGGGGACGGCG ACCCGTTGTCGATGGCGGAATATGGGTGGCTTTAG Protein sequence : MSIRDWPAAERPREKLLEWGAASLSDAELLAIFLRTGVSGRSAVDLARHLLAQFGGLRPLLEASQALFNQQLGLGPAKFA QLQAVLEMAKRHMAERLRHDSVLESPKAVRDYLKAMLRHEPHEIFGCLFLDSRHRVLGFEALSQGTIDAAMVYPRQVVKR ALAYNAAALILCHNHPSGSLEPSAADRKLTKLLQKALEVVDVRVLDHIIVGDGDPLSMAEYGWL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| z1217 | CAD33787.1 | Z1217 protein | Not tested | PAI I 536 | Protein | 1e-16 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| radC | YP_002875467.1 | DNA repair protein RadC | VFG1528 | Protein | 6e-17 | 41 |
