Gene Information

Name : algR (PFLU5935)
Accession : YP_002875421.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : positive alginate biosynthesis regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 6493352 - 6494098 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGTCCTGATCGTTGATGACGAACCCCAAGCCCGCGAGCGACTGAGCCGTTTGGTCAGTGAACTCGAGGGTTATGC
AGTACTAGAGCCGAGCGCCACCACGGGCGAAGAGGCGTTGACGCTGATCGACAGCCTCAAGCCGGATGTGGTGTTGCTCG
ATATCCGTATGCCAGGCCTTGATGGCCTGCAAGTTGCCGCCCGATTGAGCGAGCGAGAGTCACCACCCGCCGTGGTGTTC
TGCGCAGCCGGTGAAGAGTTCTCTGCGGAGACGCTTGAAGCCAGTGGTGTCAGCTTCCTCACCAAACCGGTAGCGGGCGA
AACCTTGCTCAAAGCCCTTAAAAAGGCCGAGCGCCCAACCCGCGTCCAGCTTGCTGCCCTGACTCAGCCTGCCGCCCAAA
GTGGTAACGGGCCGCGCAGCCATATCAGCGCACGCACACGCAAAGGTATCGAGCTGATCCCTTTGGGCGAGGTGGTTTAT
TTTATTGCGGATCACAAGTACGTGACCTTGCGCCACCAAGGCGGTGAAGTCTTGCTCGATGAACCGCTCAAGGCCCTTGA
GGATGAATTCGGCGACCGCTTCGTGCGTATCCACCGCAATGCGCTGGTGGCCCGCGAGCGAATCGAACGCCTGCAACGTA
CGCCCCTGGGGCATTTTCAGTTGTTCCTCAAAGGGCTTAACGGCGATGCGTTGATCGTCAGCCGACGCCATGTCGCCGGC
GTGCGCAAAATGATGCAGCAGCTTTAG

Protein sequence : 
MNVLIVDDEPQARERLSRLVSELEGYAVLEPSATTGEEALTLIDSLKPDVVLLDIRMPGLDGLQVAARLSERESPPAVVF
CAAGEEFSAETLEASGVSFLTKPVAGETLLKALKKAERPTRVQLAALTQPAAQSGNGPRSHISARTRKGIELIPLGEVVY
FIADHKYVTLRHQGGEVLLDEPLKALEDEFGDRFVRIHRNALVARERIERLQRTPLGHFQLFLKGLNGDALIVSRRHVAG
VRKMMQQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 3e-48 45
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 3e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_002875421.1 positive alginate biosynthesis regulatory protein VFG0119 Protein 4e-99 81