Gene Information

Name : ssuB (PFLU5854)
Accession : YP_002875342.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Resistance
Product : aliphatic sulfonates transport ATP-binding subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 6409525 - 6410331 bp
Length : 807 bp
Strand : -
Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease

DNA sequence : 
ATGACAGCTCAACAACCCCCGCGCCTGCTCAAGGGCATCCCCCTGGCGGTGCGCAAGTTGCGCAAGGCCTTTGGCGCGCG
CGAAGTGCTCAAGGACATCGACCTGCACATTCCTGCCGGCCAATTCGTGGCGGTGGTCGGTCGCAGTGGTTGCGGCAAAA
GTACCTTGCTGCGCCTGCTGGCCGGCCTGGACAAAGCCAGCGGCGGCGAGCTGCTGGCCGGTTCCGCACCGCTAAGCGAA
GCCATTGAAGACACGCGGCTGATGTTCCAGGAAGCGCGCCTGCTGCCGTGGAAAAAGATCATCGATAACGTCGGCCTGGG
CCTTAAAGGCAACTGGCGCCCCAAAGCGTTGGAAGCCCTTGAGGCGGTCGGCCTGGCCGAACGTGCCAATGAATGGCCGG
CGGCGCTGTCCGGCGGGCAGAAGCAACGGGTGGCCCTGGCCCGTGCGCTGATCCACCAACCGCGCTTGCTGCTGCTCGAT
GAACCGCTGGGCGCGCTGGATGCCCTGACCCGCATTGAGATGCAGCAACTGATCGAAAACCTCTGGCAGAAGCACGGTTT
CACCGTGTTGCTGGTGACCCACGACGTCAGCGAAGCCGTGGCCATTGCCGACCGGGTGATCCTGATCGAAGACGGCGAAA
TCGGCCTCGACCTCATCGTCGACCTGCCGCGCCCACGTGCCCGGGGCTCACATCGCCTGGCCGCGCTGGAAGCCGAAGTG
CTCAACCGTGTGTTGTCGTTACCCGGCACGCCGCCGGAACCCGAACCTGTTTCACCGCTGCCTACGCAATTGCGTTGGGC
TCAATAA

Protein sequence : 
MTAQQPPRLLKGIPLAVRKLRKAFGAREVLKDIDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLDKASGGELLAGSAPLSE
AIEDTRLMFQEARLLPWKKIIDNVGLGLKGNWRPKALEALEAVGLAERANEWPAALSGGQKQRVALARALIHQPRLLLLD
EPLGALDALTRIEMQQLIENLWQKHGFTVLLVTHDVSEAVAIADRVILIEDGEIGLDLIVDLPRPRARGSHRLAALEAEV
LNRVLSLPGTPPEPEPVSPLPTQLRWAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-35 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_002875342.1 aliphatic sulfonates transport ATP-binding subunit NC_012469.1.7686878. Protein 5e-16 42