|
Name : PFLU5813 (PFLU5813) Accession : YP_002875302.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Resistance Product : putative heavy metal ABC transporter membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 6367126 - 6369378 bp Length : 2253 bp Strand : - Note : - DNA sequence : ATGAGCGATTCCATCCACACCCCGCACAAACATGACCACGATCACGATCATGGCCCGAAGAAATTGACCCCCGTGCATGA CCACGGCCACGGCGGCTCCTGCTGTTCCGGCACGCCGGCCCCTGCGTTGGTGCAACTGAGCGAAGCGCCCACCGCCGGTT CGCGGCTGAGCACCTTTCGCATCGAAGCCATGGACTGCCCCACCGAGCAGACGCTGATCCAGAACAAACTGGGCAAGCTT GCGGGCGTGCAGCAGCTGGAATTCAACCTGATCAACCGCATCCTCGGCGTCACCCATGACCTGCCGAGCACTGCGCCGAT CATCGACGCGATCAAATCCCTCGGCATGCAGGCCGATCCCATCGAAGAAGGCACGCCTGCCGCTGAGCCGCCCGCCAAGA AACACTGGTGGCCGCTGGCGTTGTCCGGCGTCGGCGCGTTGGCTGCCGAAGTGCTGCACTTCACTGACGCCGCGCCCACC TGGGTGATCGCGGTGGTGGCGTTGGTGTCGATCCTCAGCGGCGGCCTCACCACGTACAAAAAGGGCTGGATTGCCCTGAA AAACCTCAACCTGAACATCAATGCCTTGATGAGTATCGCGGTGACCGGCGCGATCCTGATTGGCCAGTGGCCGGAAGCCG CGATGGTGATGTTCCTGTTTACTGTCGCCGAGTTGATCGAAGCCAAATCCCTGGATCGCGCGCGTAATGCCATCAGCGGC TTGATGCAGATGACACCCGAGCAGGCCACCGTGCAGCAGGCTGACGGCACGTGGGTTGAAAAAGAGGTCAAAAGCATAGA AATGGGTGCCATCGTGCGGGTTAAGCCCGGCGAACGCATCGGCCTGGACGGTGAAGTCACTGCCGGCCAATCCACCATCG ACCAGGCGCCGATCACCGGTGAAAGCCTGCCGATTGAAAAGACCGTGGGCGATAAAGTCTTCGCCGGCACCATCAACCAG GCCGGTTCCCTGGAATATAAAGTGACCGCGGCGGCCAACAACTCCACCCTGGCGCGCATCATTCACGCGGTGGAACAGGC CCAAGGCGCACGGGCGCCGACCCAGCGGTTCGTCGACAGGTTCTCGAAAATCTACACCCCGGCCGTGTTCCTGTTTGCCC TGGGCGTGGCCATTGTTCCGCCGCTGTTTATGGCTGGCGTCTGGTTCGACTGGATCTACCGTGCCCTGGTGCTGCTGGTG GTGGCATGCCCGTGTGCGCTGGTGATTTCCACCCCAGTGACCATCGTCAGCGGTCTCGCTGCGGCGGCGCGCAAAGGCAT CCTGATCAAGGGCGGCGTGTACCTGGAGGGCGGTTACAAGCTCGACTACCTGGCCCTCGACAAGACCGGCACCATTACCC ACGGCAAGCCGGTGCAAACCGATTACCTGGCGCTGTTCCCTAACGTCGAAGACAGCGCGCCGGCCCTGGCCGCCAGTCTG GCCGGGCGTTCCGATCACCCAGTGTCGCTGGCGATTGCCAACGCGGCTGTGGATAAAAACCTGCCCACCCACGTTGTGGA TAACTTCGAGGCCCTGGCCGGTCGCGGCGTGCGCGGGGATATCAATGGCGAAACCTACCACTTGGGCAACCACCGCCTGG TGGAAGACCTGGGCCTCTGCTCGCCGGCGCTGGAAGAGAAACTCTTCGCCCTCGAGAAACAGGGCAAGTCCGTGGTGCTG CTGCTCGACAAATCCGGCCCGCTGGCGCTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGCGAGGCCATCCAGCA ACTGCACGAGCTGGGCATCAAGACCCTGATGCTCACCGGCGACAACACCCACACCGCCCAGGCGATTGCTGCCCAGGTCG GCATCGACCAGGCCCAGGGCGACCTGTTGCCTACCGATAAACTGCAAGCCATCGAAACCCTCTACGGCCAAGGCCATCGC GTGGGCATGGTCGGCGACGGCATTAACGACGCACCGGCGCTGGCCCGTGCCGAGATCGGTTTTGCCATGGCCGCCGCCGG TACCGACACCGCCATCGAGACCGCTGATGTAGCGCTGATGGATGATGACCTGCGCAAGATTCCGGCATTCATTCGTCTGT CGCGGCAAACGTCGAGTATCCTCAAACAGAACATCGCCCTGGCGCTGGTGATCAAGGCGATTTTTCTCGCCGTGACCTTC CTGGGCATGGCCACCATGTGGATGGCGGTGTTCGCCGACATGGGCGTGAGCCTGTTGGTGGTGTTCAATGGCCTGCGCCT GTTGCGCAAATAG Protein sequence : MSDSIHTPHKHDHDHDHGPKKLTPVHDHGHGGSCCSGTPAPALVQLSEAPTAGSRLSTFRIEAMDCPTEQTLIQNKLGKL AGVQQLEFNLINRILGVTHDLPSTAPIIDAIKSLGMQADPIEEGTPAAEPPAKKHWWPLALSGVGALAAEVLHFTDAAPT WVIAVVALVSILSGGLTTYKKGWIALKNLNLNINALMSIAVTGAILIGQWPEAAMVMFLFTVAELIEAKSLDRARNAISG LMQMTPEQATVQQADGTWVEKEVKSIEMGAIVRVKPGERIGLDGEVTAGQSTIDQAPITGESLPIEKTVGDKVFAGTINQ AGSLEYKVTAAANNSTLARIIHAVEQAQGARAPTQRFVDRFSKIYTPAVFLFALGVAIVPPLFMAGVWFDWIYRALVLLV VACPCALVISTPVTIVSGLAAAARKGILIKGGVYLEGGYKLDYLALDKTGTITHGKPVQTDYLALFPNVEDSAPALAASL AGRSDHPVSLAIANAAVDKNLPTHVVDNFEALAGRGVRGDINGETYHLGNHRLVEDLGLCSPALEEKLFALEKQGKSVVL LLDKSGPLALFAVADTVKDSSREAIQQLHELGIKTLMLTGDNTHTAQAIAAQVGIDQAQGDLLPTDKLQAIETLYGQGHR VGMVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPAFIRLSRQTSSILKQNIALALVIKAIFLAVTF LGMATMWMAVFADMGVSLLVVFNGLRLLRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 67 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 8e-119 | 42 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 8e-119 | 42 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 6e-118 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PFLU5813 | YP_002875302.1 | putative heavy metal ABC transporter membrane protein | BAC0298 | Protein | 0.0 | 66 |
| PFLU5813 | YP_002875302.1 | putative heavy metal ABC transporter membrane protein | BAC0092 | Protein | 2e-73 | 42 |
| PFLU5813 | YP_002875302.1 | putative heavy metal ABC transporter membrane protein | BAC0461 | Protein | 1e-75 | 42 |
