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Name : PFLU5308 (PFLU5308) Accession : YP_002874807.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : putative transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 5826185 - 5827711 bp Length : 1527 bp Strand : + Note : - DNA sequence : ATGACTTCTTTGCCCGATCTCGATCAAATGCCCCCTGAACAACTGCGCGCGCTGGCTGCGCAGCTGATGTCCAAGGTCGA CACCATGGGCAGAAAGATCCATCGTGATGAGACGATCATCGAGCAGCTCACCCACGAAATCGCCATTCTCAAGCGACACA AGTTTGCTAAGCGCAGCGAGCAGATCAGCCCGGCGCAAGGCAGCTTGCTCGATGACCTGCTTAATACCGACCTTGAAGCC ATCGAGGCCGACTTAAAAGCACTTCATCCCGCACCCGCGCAGATAGAACCACGCCAGCAACCCAAGCGTGCGCCGTTGCC GCCGCAGTTCCCGCGCACTGTGATCCATCACGAGCCGGACAACACTCAGTGCGCTTGCGGCTGTCAGCTTCAGCGCATCG GTGAAGACGTCAGCGAGAAGCTGGACTACACGCCGGGCGTGTTCACCGTCGAACAGCACGTTCGTGGGAAATGGGCCTGC CGGCAGTGCGAAACACTGACCCAGGCCCCGGTGCCGCCGCAGGTGATCGACAAGGGCATCCCCACTGCCGGCCTGCTGGC GCAAGTGATGGTGGCCAAATTCGCCGACCACCTGCCGCTCTATCGACAGGAAAAGATCTTCGGCCGTGCCGGCCTTGCCA TCCCGCGCTCGACACTAGCGCAGTGGATGGGTCAAACCGGCGTGCAGCTTCAGCCGCTGGTCGATGCGCTGCGCGAAGCA GTGCTGGCCCAGCGCGTAGTCCACGCCGATGAAACACCGGTACAAATGCTGGCTCCAGGAGAGAAGAAAACCCACCGCGC TTACGTCTGGGCCTATAGCAGCACGCCATTCTCGGCACTCAAGGCCGTGGTCTACGACTTCAGCCCCAGCCGTGCCGGCG AACATGCGCGTAACTTCCTGGGCACGTGGAGCGGCAAGCTGGTCTGTGACGACTTTGCCGGCTACAAGGCAAGCTTCGAG CTGGGCATCACCGAAATCGGCTGCATGGCCCACGCGCGCCGCAAGTTCTTCGACCTGCACGTCGCGAATAAAAGCCAGTT GGCTGAGCAGGCGCTTCACTCGATTGGCGGGCTGTACGAAGTCGAGCGACACGCTAAGGAAATGAGCGACGAAGACCGTT GGCGATTACGCCAGGAAACGGCGGTGCCCATCGCTGAAAAACTGCATGAGTGGATGCTGGCCCAACGCGAACTTGTGCCC GAGGGCTCTGCTACGGCCAAGGCCCTGGATTACAGCCTTAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGTGC TGTGCCCATCGACAACAACCAGATCGAGAACTTGATCCGGCCGTGGGCGCTTGGGCGGTCGAACTGGTTGTTTGCTGGGT CGCTGCGCAGCGGCAAACGGGCGGCGGCGATCATGAGCCTGATCCAGTCGGCACGTATGAACGGGCATGATCCGTATGCT TATCTCAAGGATGTGCTGACGCAGCTGCCGACGCAGCGGGCCAGCGAGATCGAGCGACTGCTACCACATAGCTGGGCGCC TGCTTAG Protein sequence : MTSLPDLDQMPPEQLRALAAQLMSKVDTMGRKIHRDETIIEQLTHEIAILKRHKFAKRSEQISPAQGSLLDDLLNTDLEA IEADLKALHPAPAQIEPRQQPKRAPLPPQFPRTVIHHEPDNTQCACGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWAC RQCETLTQAPVPPQVIDKGIPTAGLLAQVMVAKFADHLPLYRQEKIFGRAGLAIPRSTLAQWMGQTGVQLQPLVDALREA VLAQRVVHADETPVQMLAPGEKKTHRAYVWAYSSTPFSALKAVVYDFSPSRAGEHARNFLGTWSGKLVCDDFAGYKASFE LGITEIGCMAHARRKFFDLHVANKSQLAEQALHSIGGLYEVERHAKEMSDEDRWRLRQETAVPIAEKLHEWMLAQRELVP EGSATAKALDYSLKRWVALTRYLDDGAVPIDNNQIENLIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPYA YLKDVLTQLPTQRASEIERLLPHSWAPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL059 | AAP84184.1 | transposase | Not tested | PAPI-1 | Protein | 0.0 | 86 |
| tnpC | AEZ06051.1 | transposase | Not tested | Tn6167 | Protein | 2e-138 | 53 |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 1e-60 | 42 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 4e-63 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PFLU5308 | YP_002874807.1 | putative transposase | VFG1700 | Protein | 5e-61 | 42 |
| PFLU5308 | YP_002874807.1 | putative transposase | VFG1513 | Protein | 2e-63 | 42 |
