Gene Information

Name : PFLU5282A (PFLU5282A)
Accession : YP_002874784.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : putative DNA invertase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 5800822 - 5801457 bp
Length : 636 bp
Strand : -
Note : -

DNA sequence :
ATGGGAAAGCGAATTGGGTACGCCCGAGTTTCGACTGATGATCAGAATCTCGACCTGCAGCGAGATGCACTTGCCCTGGC
TGGGTGCTCCGTGGTTTACGAGGAGACAATGAGCGGCAAGTCAGCGGACAGGCCGGAGCTGGGGCATTGCCTCAAGGCTT
TGCGTAGCGCGGATACTTTGGTCGTGTGGCGACTGGATCGTCTCGGGCGCTCTTTGCCTGACCTGGTCGGGATCGTCAGT
CGTTTGGAGCAGGAAGGGGTGGCCTTCGAGTCCATAACCGAACGAATCGAAACTACCAGCGCTGCCGGCAAGCTGATCTT
TCATGTGTTTGCTGCCCTGGCGGAGTTCGAGCGCAACCTCATTCGAGAGCGAACTCGTGCAGGACTGGCCGCGGCTCGGG
CTCGTGGGCGTAAGGGGGGGCGCAAGCCTGCGCTGGATGATCGTCAGGTACGTGAGATACGGGCCCTTCTCAGAGATCCG
GAGATACGAGTAACCGATGTTGCCCGACGGTATGGCGTTTCCCGAACAACGCTTTACCGCTACGTCGGTTCTGCGACAGT
AGCGACAGGCTGGGTACCAGGAACAGTACGCGCTTGCCCTTGCCGGCCTGCTGCTCGGCAATTTTCAGGCTGGTGA

Protein sequence :
MGKRIGYARVSTDDQNLDLQRDALALAGCSVVYEETMSGKSADRPELGHCLKALRSADTLVVWRLDRLGRSLPDLVGIVS
RLEQEGVAFESITERIETTSAAGKLIFHVFAALAEFERNLIRERTRAGLAAARARGRKGGRKPALDDRQVREIRALLRDP
EIRVTDVARRYGVSRTTLYRYVGSATVATGWVPGTVRACPCRPAARQFSGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGF35025.1 resolvase Not tested SGI1 Protein 3e-53 69
res AGF35059.1 resolvase Not tested SGI1 Protein 3e-53 69
res AGK06929.1 resolvase Not tested SGI1 Protein 3e-53 69
res AGK06966.1 resolvase Not tested SGI1 Protein 3e-53 69
res AGK07012.1 resolvase Not tested SGI1 Protein 3e-53 69
res AGK07070.1 resolvase Not tested SGI1 Protein 3e-53 69
res AAK02044.1 resolvase Not tested SGI1 Protein 3e-53 69
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 3e-53 69
res AGF34985.1 resolvase Not tested SGI1 Protein 3e-53 69
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 5e-31 54
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 8e-31 54
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 8e-31 54
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 1e-25 51
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 3e-30 50
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 7e-30 49
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 7e-30 49
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 8e-17 43
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 8e-17 43
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 1e-16 43
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 6e-17 42
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 4e-17 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU5282A YP_002874784.1 putative DNA invertase VFG1030 Protein 4e-17 43