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Name : glcA (PFLU5278) Accession : YP_002874780.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : glycolate permease Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 5793200 - 5794894 bp Length : 1695 bp Strand : + Note : - DNA sequence : ATGCAAACCTGGCAACAGCTCTACAGCCCGCTCGGCAGCCTCGGCCTGTCCGCATTAGCGGCCGTCATTCCGATCGTATT CTTCTTCCTGGCCCTGGCCGTGTTTCGCCTCAAAGGCCACGTGGCCGGCAGCATCACCTTGGCGCTGTCGATCCTGGTGG CGATCTTTGCCTTTAAGATGCCGGTGGACATGGCACTGGCCGCCGCCGGTTATGGCTTTGCCTACGGCCTGTGGCCTATC GCGTGGATCATTGTCGCCGCGGTGTTCCTCTACAAACTCACGGTCAAGAGCGGCCAGTTCGAGATCATTCGCAGCTCGGT GCTGTCGATCACTGACGACCAGCGCCTGCAAGTGCTGCTGATCGGCTTCTGTTTCGGCGCCTTCCTGGAAGGTGCGGCCG GTTTCGGCGCCCCCGTGGCAATCACCGCCGCACTGCTGGTCGGCCTCGGTTTCAACCCGCTGTACGCCGCGGGTCTGTGC CTGATTGCCAACACCGCACCGGTGGCCTTTGGCGCATTGGGTATCCCGATCATCGTTGCGGGTCAAGTGACCGGCATTGA TGCGTTCAAGATTGGCGCCATGACCGGTCGCCAACTGCCGCTGCTGTCGCTGTTCGTGCCGTTCTGGCTGGTGTTCATGA TGGACGGCCTGCGCGGCGTGCGTGAAACCTGGCCGGCGGCGCTGGTAGCGGGCTTGAGCTTTGCCATCACTCAGTACTTC ACGTCCAACTTCATCGGCCCTGAACTGCCGGATATCACCTCGGCCCTTGCCAGCCTGATTTCCCTGACCCTGTTCCTGAA AGTGTGGCAACCCAAGCGCACCGCTGGCGCACAGATTGCCGGCGCCACTTCCAGCGCGGCAGTCACCGCCAGTGCCGGCG GTTTCGGCCTGCCACGCAACACGGTTGTCTCGCCCTACAGCCTGGTGCAGATTTTCAAGGCCTGGTCACCGTTCCTGATC CTTACCGTGCTGGTGACGATCTGGACGCTCAAACCGTTCAAGGCGATGTTCGCCGCCGGCGGCTCGATGTACAGCTGGGT GTTCAACTTCGCGATTCCGCACTTGGACCAAATGGTGATCAAGGTCGCCCCCATCGTGACCAACCCCACCGCGATCCCGG CCGTGTTCAAGCTGGACCCGATTTCCGCGACCGGCACCGCGATTTTCTTCTCTGCATTGATCTCTATGCTGGTGCTAAAG ATCAACATTAAAACTGGTCTTACCACTTTAAAAGAGACTTTCTATGAACTTCGCTGGCCCATCCTGTCCATTGGCATGGT GTTGGCGTTCGCATTCGTCACCAATTACTCCGGCATGTCGTCGACCATGGCGCTGGTATTGGCCGGCACCGGTGCAGCCT TCCCGTTCTTCTCGCCTTTCCTCGGGTGGCTGGGCGTTTTCCTGACAGGTTCTGATACCTCGTCCAACGCCCTGTTCAGC TCGCTGCAGGCCACCACTGCGCATCAGATCGGCGTGAACGACACGCTGCTGGTCGCGGCGAATACCAGCGGCGGCGTCAC CGGCAAAATGATCTCGCCTCAATCGATCGCCGTGGCGTGCGCCGCCACTGGCCTGGTAGGCAAGGAATCCGACCTGTTCC GCTTTACCCTCAAGCACAGCCTGTTCTTTGCCACGATCGTCGGGCTGATCACCCTGGCCCAGGCCTACTGGTTCACCGGT ATGCTGGTGCACTGA Protein sequence : MQTWQQLYSPLGSLGLSALAAVIPIVFFFLALAVFRLKGHVAGSITLALSILVAIFAFKMPVDMALAAAGYGFAYGLWPI AWIIVAAVFLYKLTVKSGQFEIIRSSVLSITDDQRLQVLLIGFCFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLC LIANTAPVAFGALGIPIIVAGQVTGIDAFKIGAMTGRQLPLLSLFVPFWLVFMMDGLRGVRETWPAALVAGLSFAITQYF TSNFIGPELPDITSALASLISLTLFLKVWQPKRTAGAQIAGATSSAAVTASAGGFGLPRNTVVSPYSLVQIFKAWSPFLI LTVLVTIWTLKPFKAMFAAGGSMYSWVFNFAIPHLDQMVIKVAPIVTNPTAIPAVFKLDPISATGTAIFFSALISMLVLK INIKTGLTTLKETFYELRWPILSIGMVLAFAFVTNYSGMSSTMALVLAGTGAAFPFFSPFLGWLGVFLTGSDTSSNALFS SLQATTAHQIGVNDTLLVAANTSGGVTGKMISPQSIAVACAATGLVGKESDLFRFTLKHSLFFATIVGLITLAQAYWFTG MLVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 4e-154 | 77 |
