Gene Information

Name : PFLU5111 (PFLU5111)
Accession : YP_002874616.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : putative two-component system response regulator protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5609864 - 5610526 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCCTACTCCTTGTCGAAGATGACCGTGCCCTCGGCCAAGGCATTCGCGTGGCATTGGGCGCCGAAGGCTACACCCT
CGATTGGTTGCAGGATGGCGTTGCGGCCCTGCATGCCTTGCGCACGGAAAGCTTCGACCTGTTGCTGCTCGACCTCGGCC
TGCCGCGCCTCGACGGCCTCGACCTGTTGCAGCAACTGCGCGCCGAGCAACATGACGTGCCGGTGCTGATCCTCACCGCC
CGCGACGGTACCGCCGAGCGCATCGCCGGCTTGGACGCGGGGGCCGACGACTACCTGGTCAAACCCTTCGACGTCGAAGA
GCTCAAAGCCCGCGTGCGCGCCCTGTTGCGCCGCAGCCAGGGCCGCGCACAACCGATGTTGGAACACGCCGGCATCAGCC
TCGACCCGGCCACCCAGCAAGTGCGCTATCAGGACGCCGACATCATCGTCACCCCGATGGAGTACCAACTGCTGCACCAA
CTGATGGTGCGCCCCGGCAAAGTCGTGACCCGCGAGCGGTTGTCCCGCGCGCTGTACGGTTGGCAGGATCGGGTCGAGAG
CAATACCTTGGAAGTGCTGATCCACAACCTGCGCAAAAAGTTATCCACCGAGCTGATTCGCACCGTGCGCGGTGTCGGCT
ATGTGCTGGCGCTCAAACCATGA

Protein sequence : 
MRLLLVEDDRALGQGIRVALGAEGYTLDWLQDGVAALHALRTESFDLLLLDLGLPRLDGLDLLQQLRAEQHDVPVLILTA
RDGTAERIAGLDAGADDYLVKPFDVEELKARVRALLRRSQGRAQPMLEHAGISLDPATQQVRYQDADIIVTPMEYQLLHQ
LMVRPGKVVTRERLSRALYGWQDRVESNTLEVLIHNLRKKLSTELIRTVRGVGYVLALKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-30 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU5111 YP_002874616.1 putative two-component system response regulator protein BAC0197 Protein 2e-29 42
PFLU5111 YP_002874616.1 putative two-component system response regulator protein NC_002516.2.879194.p Protein 2e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU5111 YP_002874616.1 putative two-component system response regulator protein VFG0473 Protein 5e-36 48
PFLU5111 YP_002874616.1 putative two-component system response regulator protein VFG1390 Protein 7e-31 46
PFLU5111 YP_002874616.1 putative two-component system response regulator protein VFG0596 Protein 3e-21 41