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Name : PFLU5039 (PFLU5039) Accession : YP_002874542.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 5536128 - 5537774 bp Length : 1647 bp Strand : - Note : - DNA sequence : ATGCAAAACTGGCAACACTCGGTGATCTACCAGATCTACCCCAAAAGCTTCCACAGCCACGCGGGTAACGCCACCGGTGA CCTGCTGGGCATCGTGGACAAACTCGACTACCTCAAATGGCTGGGTGTCGACTGCCTGTGGATCACCCCGTTCCTGCGCT CGCCACAGCGCGACAACGGCTACGACATCAGCGACTACTACGCCATCGACCCCAGCTACGGGACCATGGCCGACTGCGAC CTGCTGATCAGCGAAGCGGCCAAGCGTGGCATCAAGCTGATGCTCGATATCGTGGTCAACCACACGTCCATCGAACACGA GTGGTTCCAGCAGGCGCGCAGCAGCCTCGACAACCCGTACCGCGACTTCTACATCTGGCGCGACCAGCCGAACAACTGGG AATCCAAGTTCGGTGGCTCGGCCTGGGAATACGAGGCGCAAACCGGGCAGTACTTCCTGCACTTGTTTGACCACACCCAG GCCGACCTGAATTGGGACAACCCCAAGGTGCGCGCCGAGGTGTTCAAGCTGATGCGCTTCTGGCGCGACAAAGGCGTGGG CGGTTTCCGCCTGGACGTGATCAACCTGATCTCCAAGCCCGCCGATTTCCCCGAAGACAGCAGCGACGGCCGTCGCTTCT ACACCGACGGCCCGAACGTGCACGACTACCTGCAGGAAATGCACCGCGAAGTCTTCGAAGGGCACGACCTGATCAACGTC GGCGAGATGTCATCCACCAGCCTTGAACACTGCATCCGCTACTCGCGGCCGGAGTCGAAAGAGCTGTCGATGACCTTCAA CTTTCATCACCTGAAAGTCGATTACCCGAACCTTCAGAAGTGGGTGAAGGCCGACTTCGACTTCCTGCAGCTCAAGCAGA TCCTCTCGGATTGGCAACTGGGCATGCAGGCCGGTGGCGGCTGGAACGCGCTGTTCTGGTGTAACCACGACCAGCCACGG GTGGTCTCGCGGTTCGGCCATGACGGTGAGCACCGTGTGGTCTCGGCCAAGATGCTGGCGACCGCGCTGCACTTCCTCCA AGGCACGCCATTTGTGTACCAGGGCGAAGAGCTGGGCATGACCAATCCGGGCTTCGACAGGATCGAGCAGTACCGCGATG TGGAGACCCTCAACATCTTCCGGCTCAAGCGCGATGCGGGCGAGTCCGAGGCGTCGAGCATGGCCGCGATCATGCAGAAG TCCCGCGACAACGGCCGCACGCCGATGCAGTGGAATGCCCAGGCGAACGCCGGTTTCAGCAGCGGCGAGCCGTGGATCGG CATCCCGGCCAATGCGGCGCAGATCAACGTCGAGCGCCAGCTGGATGACCCGGATTCAGTGCTGCATCACTACCGTGCGC TGATCGCCTTGCGCCGTCACGAGCCGCTGATCCAGGCCGGTGTTTATCGCCAGTTGCTGCAAGACCATCTGCAGGTCTGG GCCTACCTGCGCGAAGGCCATGGCGAGCAGCTGCTGGTGCTGAACAACTTCTACGGCACGCCCTGCGAAATCCAACTGCC GGACGGCGTCATCAACCCGGCCAGCGAACAACGCCTGCTGATCAGCAACTACCCGGACTGCCCGGTGCGTACGGGCACGG TAGCGCTGCGCCCGTACGAATCGTTTGTGTTGCACCTCAAGGACTGA Protein sequence : MQNWQHSVIYQIYPKSFHSHAGNATGDLLGIVDKLDYLKWLGVDCLWITPFLRSPQRDNGYDISDYYAIDPSYGTMADCD LLISEAAKRGIKLMLDIVVNHTSIEHEWFQQARSSLDNPYRDFYIWRDQPNNWESKFGGSAWEYEAQTGQYFLHLFDHTQ ADLNWDNPKVRAEVFKLMRFWRDKGVGGFRLDVINLISKPADFPEDSSDGRRFYTDGPNVHDYLQEMHREVFEGHDLINV GEMSSTSLEHCIRYSRPESKELSMTFNFHHLKVDYPNLQKWVKADFDFLQLKQILSDWQLGMQAGGGWNALFWCNHDQPR VVSRFGHDGEHRVVSAKMLATALHFLQGTPFVYQGEELGMTNPGFDRIEQYRDVETLNIFRLKRDAGESEASSMAAIMQK SRDNGRTPMQWNAQANAGFSSGEPWIGIPANAAQINVERQLDDPDSVLHHYRALIALRRHEPLIQAGVYRQLLQDHLQVW AYLREGHGEQLLVLNNFYGTPCEIQLPDGVINPASEQRLLISNYPDCPVRTGTVALRPYESFVLHLKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-120 | 45 |
