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Name : thiC (PFLU0492) Accession : YP_002870166.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 558161 - 560065 bp Length : 1905 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGCACAGAAATAAAAAGTACAAAACTGAAAAACACCGTGCACTTGAGTGAATCGGCCAAGGTCGACTCCGGCTCCGT GCAGCCGTTTACCCGCTCGCAAAAAATCTACGTGCAGGGCACTCGCCCGGACATCCGCGTGCCGATGCGCGAAATCAGCC TGGACGTCACCCCTACCGACTTCGGCGGTGAAATCAACGCCCCCGTGGTGGTCTATGACACCTCCGGCCCGTACACCGAC CCGAATGTGATCATCGATGTGCGCAAAGGCCTGGGCGATGTGCGCTCGCCGTGGATCGAAGTGCGTGGTGACACCGAGCG CCTGTCCGGCCTCAGCTCGCATTTTGGCCAACAGCGCCTCAGCGACGCCGAACTGACCGCCCTGCGCTTCGCCCACGTGA AAAACCCGCGCCGCGCCAAGGCCGGTGCCAACGTCACGCAGATGCACTACGCACGCAAAGGCATCATCACCGCCGAGATG GAATACGTCGCCATCCGCGAAAACATGAAGCTGGAAGAAGCCCGCGCCAGCGGCCTGCTCGACCAGCAACACGCCGGCCA TAGCTTCGGCGCCAGCGTGCCGAAAATCATCACCCCTGAATTTGTGCGCGAAGAAATCGCCCGTGGCCGAGCGATCATCC CGGCCAACATCAACCACACCGAACTGGAACCGATGATCATCGGCCGTAACTTCCTGGTGAAGATCAACGGCAACATCGGC AACAGCGCCCTGGGTTCGTCCATCGAAGAAGAAGTGGCGAAACTCACCTGGGGCATTCGCTGGGGCTCGGACACGGTGAT GGACCTGTCCACCGGCAAGCACATCCACGAAACCCGCGAGTGGATCATCCGTAACTCGCCCGTGCCAATCGGCACCGTGC CGATCTACCAGGCCCTGGAAAAAGTCGGCGGCGCCGCCGAGGACCTGACCTGGGAGCTGTTCCGCGACACCCTGATCGAG CAGGCCGAGCAGGGCGTCGACTACTTCACCATCCATGCCGGCGTGCTGTTGCGCTACGTGCCGCTGACCGCCAAGCGCGT CACCGGCATCGTGTCCCGTGGCGGTTCGATCATGGCCAAGTGGTGCCTGGCGCACCACAAAGAGAACTTCACCTACACGC ATTTCGACGAAATCTGCGAAATCATGAAGGCTTACGACGTCAGCTTCTCCCTCGGTGACGGCCTGCGCCCGGGCTCGATT GCCGACGCCAACGACGCCGCGCAATTCGGCGAGCTGGAAACCTTGGGCGAACTGACCAAGATCGCGTGGAAGCACGACGT GCAAACCATGATCGAAGGCCCTGGCCACGTGCCGATGCAGTTGATCAAGGAGAACATGGACAAGCAGCTCGAGTGCTGTG ACGAAGCGCCGTTCTACACCCTCGGCCCGCTGACCACCGACATCGCGCCGGGCTACGACCACATCACCTCCGGCATTGGT GCGGCAATGATCGGCTGGTTCGGTTGCGCCATGCTTTGCTACGTCACGCCCAAGGAACACTTGGGCCTGCCGAACAAGGA TGACGTGAAGACCGGGATCATCACCTACAAGATCGCTGCCCACGCGGCTGACCTCGCGAAAGGCCATCCGGGCGCGCAGA TCCGCGATAACGCCTTGAGCAAGGCGCGCTTCGAGTTCCGCTGGGAAGACCAGTTCAACCTCGGCCTGGACCCGGACACC GCGCGTTCGTATCACGATGAAACCCTGCCGAAGGACTCGGCCAAGGTCGCGCATTTCTGCTCGATGTGCGGGCCGAAGTT CTGCTCGATGAAAATCACCCAGGAAGTGCGTGAATACGCGGCCAACCAACGGATTGAAGCGGTGGACGTGGAGGTGGCCA AGGGCTTGGCTGAACAGGCGGAGCGGTTCAAGCAGGAAGGCAGTCAGCTGTACAAAAAGGTCTGA Protein sequence : MSTEIKSTKLKNTVHLSESAKVDSGSVQPFTRSQKIYVQGTRPDIRVPMREISLDVTPTDFGGEINAPVVVYDTSGPYTD PNVIIDVRKGLGDVRSPWIEVRGDTERLSGLSSHFGQQRLSDAELTALRFAHVKNPRRAKAGANVTQMHYARKGIITAEM EYVAIRENMKLEEARASGLLDQQHAGHSFGASVPKIITPEFVREEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIG NSALGSSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGAAEDLTWELFRDTLIE QAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFTYTHFDEICEIMKAYDVSFSLGDGLRPGSI ADANDAAQFGELETLGELTKIAWKHDVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIG AAMIGWFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDT ARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRIEAVDVEVAKGLAEQAERFKQEGSQLYKKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 78 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 78 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 72 |
