Gene Information

Name : qacE (PFLU0488)
Accession : YP_002870162.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : quaternary ammonium compound-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 553521 - 553856 bp
Length : 336 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGCCGCTTACTGCTACCTGGCCATTGCCATCTGCTCGGAAGTGATCGCCACCGTTTCCATGAAAGCCATCAAGGG
CTGGAGCACGCCGATCCCACTGCTGCTGGTGATCGTCGGCTACGGCGTGGCGTTCTGGATGCTGACGCTGGTCGTGCGCA
CGGTGCCGGTGGGCGTGGCCTACGCGGTGTGGGCCGGGATGGGCATTGTGATGGTGAGCATCGCGGCGCTGTTTATCTAC
GGGCAGAAGCTGGATATTCCGGCGATGCTGGGGATGGGCCTGATTGTGCTGGGCGTGGTAGTGATTCAGTTGTTCTCGAA
AACCGCCGGGCACTGA

Protein sequence : 
MNAAYCYLAIAICSEVIATVSMKAIKGWSTPIPLLLVIVGYGVAFWMLTLVVRTVPVGVAYAVWAGMGIVMVSIAALFIY
GQKLDIPAMLGMGLIVLGVVVIQLFSKTAGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 5e-08 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qacE YP_002870162.1 quaternary ammonium compound-resistance protein BAC0377 Protein 2e-19 57
qacE YP_002870162.1 quaternary ammonium compound-resistance protein CP004022.1.gene1549. Protein 3e-18 55
qacE YP_002870162.1 quaternary ammonium compound-resistance protein BAC0322 Protein 7e-14 52
qacE YP_002870162.1 quaternary ammonium compound-resistance protein BAC0324 Protein 1e-13 51
qacE YP_002870162.1 quaternary ammonium compound-resistance protein CP001138.1.gene1489. Protein 1e-14 49
qacE YP_002870162.1 quaternary ammonium compound-resistance protein BAC0002 Protein 3e-16 48
qacE YP_002870162.1 quaternary ammonium compound-resistance protein NC_010410.6003348.p0 Protein 3e-16 48
qacE YP_002870162.1 quaternary ammonium compound-resistance protein NC_002695.1.913273.p Protein 2e-10 43
qacE YP_002870162.1 quaternary ammonium compound-resistance protein BAC0150 Protein 2e-10 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qacE YP_002870162.1 quaternary ammonium compound-resistance protein VFG1586 Protein 2e-08 42