Gene Information

Name : PFLU4221 (PFLU4221)
Accession : YP_002873767.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : putative cobalamin ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 4665598 - 4666362 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
ATGACGGTTCTGAGCTGCACCGGGCTGGGTTTCAAGGTGCGCGAGGCCGAGCTGCTGCGCGACATTCATCTGGACGTACA
CCTGGGCGAAACCCTCGGCATCGTCGGCCCGAACGGCTCGGGCAAATCGACCTTGCTCAAACTGCTGGCCGGCCTGCGTA
CACCCGCGTCCGGCGAAGTGTTGCTGGGCGGCCGGCGCCTGGGCAGCCTGTCCCGCCGCGCCATCGCGCAGCAACTGGCG
GTGGTGGAACAACAGGCCGACACCGACGACGCCATCCGCGTGTTCGACGCCGTGGCGCTGGGCCGTACGCCGTGGTTGTC
GGCGTTGAGCCCGTGGTCCTTGGATGACGACGCCATCGTGAACCAGGCCTTGCACGACGTCGACGCCACCCACCTGAGCC
AGCGCGCCTGGCGCAGCCTCTCGGGCGGTGAACGTCAACGCGTGCACATCGCCCGTGCATTGGCGCAACGGCCGCAGATC
CTGTTATTGGATGAGCCGACCAATCACCTGGATATCCAGCATCAACTGGGGATTTTGGAGGGCGTGCAACGGTTGCCTGT
CACCACCTTGATTGCCCTGCATGACCTGAACCAGGCGCTGACCTGTGACCGCTTGGCGGTGCTGGACCACGGGCGGTTGG
TGGCGCTGGGCAACCCCCTGGACGTGCTGACGCCACAGCGGTTGCAGGAGACGTTTGGGGTGCAGGCGCACTACCTGACA
GACCCGTTTGATGGGGCGCAAATCCTGCGGCTACGCCCAATCTAA

Protein sequence : 
MTVLSCTGLGFKVREAELLRDIHLDVHLGETLGIVGPNGSGKSTLLKLLAGLRTPASGEVLLGGRRLGSLSRRAIAQQLA
VVEQQADTDDAIRVFDAVALGRTPWLSALSPWSLDDDAIVNQALHDVDATHLSQRAWRSLSGGERQRVHIARALAQRPQI
LLLDEPTNHLDIQHQLGILEGVQRLPVTTLIALHDLNQALTCDRLAVLDHGRLVALGNPLDVLTPQRLQETFGVQAHYLT
DPFDGAQILRLRPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 5e-29 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-28 42
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 7e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU4221 YP_002873767.1 putative cobalamin ABC transporter ATP-binding protein BAC0164 Protein 3e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU4221 YP_002873767.1 putative cobalamin ABC transporter ATP-binding protein VFG1042 Protein 3e-28 42