Gene Information

Name : fecE (PFLU4088)
Accession : YP_002873639.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : iron-dicitrate transporter ATP-binding subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 4522417 - 4523208 bp
Length : 792 bp
Strand : -
Note : Part of the FecBCDE citrate-dependent iron (III) transport system

DNA sequence : 
ATGAGTATTCTCCACGCGCAACAGCTTGATATCGGCTACGGTGCCACGCGCATCGTGCAAGGGTTGTCCTTCGCGCCGCC
CGCCGGGAAGGTCACTGCCTTGATCGGCCCCAATGGCTGCGGCAAATCCACCTTGCTCAAGGCGTTCGCGCGCATCCTTA
CGCCGACCCAGGGCGAATTGACCCTGGATGGCCAGGCCTACGCCGGCCTGTCCGCCCGCCAATTGGCGCGGCAGATCGCG
TTTTTGCCCCAGATATTGCCGGTGCCGGAAGGTGTCAGCGTGCGCCAACTGGTCGCGTATGGTCGCAGCCCGCACAACTC
ATTGTGGGGGCGCCTGAGCGGCAACGACCAATCCCATGTCACCCAGGCCATGCAACGCCTGGAACTGGATACCCTGGCCG
ACCGCGCCCTGGCAGATTTGTCCGGCGGCCAGCGCCAACGTGCCTGGCTGGCGATGGTGCTGGCGCAGAACGCGCCGGTG
GTGTTGCTCGATGAACCTACCACTTACCTCGACATCAGCCATCAGGTCGAGCTGCTCGACCTGATGGGCGAACTGGCGGC
TGAGGGCAAGACCGTGATCACCGTGCTGCACGACATCAACCAGGCGTGCCGTTATGCCGACCACCTGGCGGTGATGCACG
GCGGCAAGCTGGTGGCTGACGGTGCGCCGGGGGAGGTGATCAGCGCCGAGTTGATGCGGCGGGTGTTTGAGGTGCAGGTG
CAGATCATCAATGAGCCGGTGTCCGGCACGCCGATGTGCGTGGTAGAGAAAAGCACCCGTCATCACGCCTGA

Protein sequence : 
MSILHAQQLDIGYGATRIVQGLSFAPPAGKVTALIGPNGCGKSTLLKAFARILTPTQGELTLDGQAYAGLSARQLARQIA
FLPQILPVPEGVSVRQLVAYGRSPHNSLWGRLSGNDQSHVTQAMQRLELDTLADRALADLSGGQRQRAWLAMVLAQNAPV
VLLDEPTTYLDISHQVELLDLMGELAAEGKTVITVLHDINQACRYADHLAVMHGGKLVADGAPGEVISAELMRRVFEVQV
QIINEPVSGTPMCVVEKSTRHHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-68 56
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-48 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-48 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-48 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-48 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-50 46
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-51 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-49 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-49 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-50 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecE YP_002873639.1 iron-dicitrate transporter ATP-binding subunit BAC0164 Protein 4e-68 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecE YP_002873639.1 iron-dicitrate transporter ATP-binding subunit VFG1042 Protein 3e-68 56
fecE YP_002873639.1 iron-dicitrate transporter ATP-binding subunit VFG0925 Protein 5e-58 50