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Name : PFLU3967 (PFLU3967) Accession : YP_002873518.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 4380545 - 4381924 bp Length : 1380 bp Strand : + Note : E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGACGCAGACATTGAATACCACGCTGCTGATTATCGGCGGCGGCCCTGGCGGTTATGTGGCGGCGATCCGTGCCGGCCA ACTGGGCATCCCGACCCTCCTGGTGGAAGGCCAGGCGCTGGGCGGCACCTGCCTGAATATCGGCTGCATCCCGTCCAAGG CGTTGATCCATGTGGCCGAGCAATTCCAGCAAACAGTCCAGCACAGCCAGGGTTCACACCTGGGCATCGAAGTGGATGTG CCAACCCTGGACATCCGCAAGAGCGTGGAATGGAAAGACGGCATCGTTGACCGCCTGACCACCGGCGTCGCCGCGCTGCT GAAGAAGCACAAGGTGCAAGTGATCCACGGCTGGGCCAAGGTGGCGGACGGCAAGACCGTCGACGTCGGCGACCAGCGCA TCCAGTGCGAACACCTGTTGCTGGCCACTGGTTCGAAAAGCGTCAACCTGCCGATGCTGCCGATTGGCGGGCCGATCATC TCGTCCACCGAGGCGCTGGCGCCAACGCGGGTGCCCAAGCGCCTGATCGTGGTGGGCGGCGGCTATATCGGCCTGGAACT GGGGATTGCCTACCGTAAGCTTGGCGCCGAGGTCAGCGTGGTCGAGGCGCAGGATCGCATCCTGCCGGCCTACGACGCCG AATTGACCCAACCGGTGAACGAGTCCCTCAAGCACTTGGGGGTGAAGCTGTTCCTCAATCACAGCGTCAGCGGTTTTGCC GACAACCAGTTGCAGGTACGTGACCCGAAGGGTGACACCCTCTCGCTGGAAACCGACCAGGTGCTGGTCGCCGTGGGTCG CACCCCCAATACCCAGGGCTGGAACCTTGAGGCGCTGAACCTGGAGATGAACGGCGCGGCGGTCAAAATCGACAGCCGCT GCCAGACCAGCATGCGCAACGTGTGGGCCATCGGCGACCTGAGCGGCGAGCCGATGCTGGCCCATCGGGCCATGGCCCAA GGTGAAATGGTTGCCGAACTGATCAGCGGTAAATCCCGCGAATTCAACCCGGCGGCAATCCCGGCCGTGTGCTTTACCGA CCCGGAACTGGTGGTGGTCGGCAAGACACCCGATGAAGCCAAGGCCGCCGGCCTGGACTGCATCGTGTCGAGTTTCCCGT TCGCCGCCAACGGCCGCGCAATGACCCTGGAGTCGAAAACCGGCTTCGTACGGGTGGTGGCACGCCGCGACAATCATCTG ATCGTCGGCTGGCAAGCAGTTGGCGCCGGCGTGTCCGAGCTGTCCACCGCCTTCGGCCTGAGCCTGGAAATGGGCGCGCG CCTGGAAGACGTGGCCGGCACCATCCACGCCCATCCGACCCTCGGCGAGGCGGTGCAGGAGGCTGCGCTGCGGGCGCTGG GCCACGCGCTGCACCTGTAA Protein sequence : MTQTLNTTLLIIGGGPGGYVAAIRAGQLGIPTLLVEGQALGGTCLNIGCIPSKALIHVAEQFQQTVQHSQGSHLGIEVDV PTLDIRKSVEWKDGIVDRLTTGVAALLKKHKVQVIHGWAKVADGKTVDVGDQRIQCEHLLLATGSKSVNLPMLPIGGPII SSTEALAPTRVPKRLIVVGGGYIGLELGIAYRKLGAEVSVVEAQDRILPAYDAELTQPVNESLKHLGVKLFLNHSVSGFA DNQLQVRDPKGDTLSLETDQVLVAVGRTPNTQGWNLEALNLEMNGAAVKIDSRCQTSMRNVWAIGDLSGEPMLAHRAMAQ GEMVAELISGKSREFNPAAIPAVCFTDPELVVVGKTPDEAKAAGLDCIVSSFPFAANGRAMTLESKTGFVRVVARRDNHL IVGWQAVGAGVSELSTAFGLSLEMGARLEDVAGTIHAHPTLGEAVQEAALRALGHALHL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 5e-71 | 42 |
