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Name : PFLU3797 (PFLU3797) Accession : YP_002873351.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 4188992 - 4190272 bp Length : 1281 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATTCCAAACTGTTACGTAGCAACCTTCAGGACGTAGCGGACCGCCTGGCATCCCGTGGCTTTGCCTTGGATGT TGCGCGCATCGAAGCGCTGGAAGAACAGCGCAAGACCGTCCAGACCCGCACCGAAGCACTGCAGGCTGAGCGGAATGCGC GTTCCAAGTCCATCGGTCAGGCCAAGCAGCGAGGCGAAGACATTGCGCCGCTGATGGCGGATGTCGAGCGCATGGGCACC GAGCTGTCCGACGGCAAGGTCGAGCTGGAAAAAATTCAGTCCGAGCTGGATTCGATCCTGCTCGGCATCCCTAACCTCCC GCACGAATCCGTGCCGATTGGCGAAGACGAAGACGGCAACGTCGAAGTCCGCCGTTGGGGCACGCCAACAGCCTTTGATT TCGAGATCAAGGACCACGTTGCCCTGGGCGAACTGACCGGTGGCCTGGATTTCGAAACCGCCGCCAAGATGTCCGGCGCA CGCTTTGCCTTGCTGCGCGGCCCGATCGCGCGCATGCACCGCGCCCTGGCGCAGTTCATGATCAACCTGCACACCGCCGA ACACGGTTACGAAGAGGCCTACACCCCGTATCTGGTGCAGGCACCGGCGCTGATGGGCACCAGCCAGCTGCCGAAATTCG AAGAAGACCTGTTCAAGATCAGCCGCGACGGCGAAGCCGACCTGTACCTGATCCCTACCGCCGAAGTGTCGCTGACCAAT ATCGTCTCCGGCGAGATCCTCGACGCCAAGCAACTGCCGCTGAAGTTCGTGGCCCACAGCCCGTGCTTCCGCAGCGAAGC CGGTGCGTCGGGCCGTGACACCCGCGGCATGATCCGCCAGCACCAGTTCGACAAAGTCGAGATGGTGCAGGTGGTCGAGC CGTCGACCTCCATGGAGGCCCTCGAAGGCCTGACCGCCAACGCCGAACGCGTCCTGCAACTGCTGGAGCTGCCGTACCGC GTACTCGCGCTGTGCACCGGCGACATGGGTTTCAGCGCCGTTAAAACCTACGACTTGGAAGTGTGGGTGCCGAGCCAAGA CAAATACCGCGAGATTTCGTCGTGCTCCAACTGCGGTGATTTCCAGGCCCGTCGCATGCAGGCGCGTTTCCGCAACCCGG AAACCGGCAAGCCGGAGCTGGTCCACACCCTCAACGGTTCCGGTCTGGCTGTAGGCCGCACCCTGGTGGCCGTGCTGGAA AACTACCAGCAGGCTGACGGTTCTATCCGCGTACCTGAAGTGCTCAAGCCGTACATGGCGGGCGTTGAGGTCATCCGCTA A Protein sequence : MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEALQAERNARSKSIGQAKQRGEDIAPLMADVERMGT ELSDGKVELEKIQSELDSILLGIPNLPHESVPIGEDEDGNVEVRRWGTPTAFDFEIKDHVALGELTGGLDFETAAKMSGA RFALLRGPIARMHRALAQFMINLHTAEHGYEEAYTPYLVQAPALMGTSQLPKFEEDLFKISRDGEADLYLIPTAEVSLTN IVSGEILDAKQLPLKFVAHSPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSTSMEALEGLTANAERVLQLLELPYR VLALCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPEVLKPYMAGVEVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-108 | 54 |
