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Name : PFLU3643 (PFLU3643) Accession : YP_002873205.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4771 EC number : - Position : 4032628 - 4034559 bp Length : 1932 bp Strand : - Note : - DNA sequence : ATGCTTGCTGCTTCTCGCTTCTCACCCCTGGCCCTGCTGGTTGCCGGCAGCCTCAACGCGCATGCCGACGAGCCCTTGGC GCTCAATGACGTCGTGGTGACGGCCTCCGGCTTTGCCCAAAGTGTGGAAGACGCGCCGGCCTCCGTCACGGTGATCGATG GCGAAGCGCTGCGCCGTAAATCCTACCGTGACCTCGGCGACGCAGTGCGCGACGTGGAGGGCGTGACGGTCAATGGCGGC GCGAATGAAACCGACATCTCCATCCGTGGCATGCCGGCTGACTACACGCTGATCATGGTCGACGGCAAACGCCAGAGCGC ACGGGAGTCGCGGGTCAATGGCAACAGCGGCTACGAGCAAAGCTTCGTGCCGCCGGCCGCAGCCATCGAGCGTATCGAAG TGGTGCGCGGGCCGATGTCGTCGCTGTATGGCTCGGATGCAATCGGCGGGGTGATCAACGTGATCACACGCAAGGTCTCG CCGACCTGGGGCGGTTCGGTGGGTTACGACTATTCCGCACGCCAGCACAGCGACCAGGGCAATGCGCGCCAGACCCAGTT CTACCTCAGCGGCCCACTCAAGGAAGACTTCCTCGGCCTGCAGGTGTGGGGCCGTTACCTGGACCGCCAGGCCGACGACG ATATCGAGCAGACCAATGGCTTTAGTAAGGCCGACCACCGTGACCTCACCGCACGCCTGGCCTTCACGCCGACCCTCGAC CACGACATCCTGCTGGAAGCGGGCGCCACGCGCCTGAAGAACGGCGACGGCATGAGCGCCAACTGGGCCACCCGCGAGCA GGAAAACAACCGCGATCACTGGTCGCTGTCCCATCAGGGCCGTTGGGGCTGGGCCACCTCAGACGTCGCGTTGTCCCAGG AAACCTCCTCCCGCGAAGGCAAGGCCACTCCGGAGCAAACCGATATCTACGGGCGCAAACCCGAGATCAAGAACACCGTG TTCGATGCCAAGCTGGTGGTGCCCACTGCGCATAACGTCAGCACCGTCGGCCTGCAATGGAATGAAAGCGAGTTGACCGA CTGGAATCAGGGCCTGGGCGACCGCGTCGACTATAAGTTCTCGGTGGTGCAAAAAGCCCTGTTTGCCGAGAACGAATGGT CGATGACCGACAACTTTGCCCTCACCACCGGCCTGCGGTTGGACGAGCACGAAGAGTACGGCGCCCACCTCAGCCCACGG GTCTACGGCGTCTGGCGCGCCACCGAACAGTGGACGCTCAAAGGCGGCATCGCCCGTGGTTTCAAGGCCCCGGAACTGCG TGCGGTGGTCGAGGACTACGCTTACCTGCGCCGCAACCGCTTCGTGATGTTCGGCAACCCCGACCTCAAGCCCGAGACCA GCACCAACTATGAAGTCTCGGCGTTGTGGAGTAACCGCGACAACCTGTCGGCCGGCGTCACGCTGTTCTACAACGACTTC CAGGACAAGCTCTCCACCGTCACCACCGACCGCCGCTGGAACACCTACACCATCATGGAGCGGGTCAACGTCGACAAAGC GATCATTCAGGGCGTGGAACTGAACGGCCAATGGGACATCAGCCCCAGCGTGCTGCTCAAGGCCAATTACACCTACACCG ATTCGGAGCAGAAAAGCGGCGCCAACAAAGGCGCACCCCTGGCCCTCACGCCAGAGCAAAAGGCCAACGTGCGCAGCGAA TGGACAATCAACGACCGCACCCAGGCCTGGGTTTCGCTGAGTTACTACGGTGAAGAAACCGGTAATACGATTACCGACGA ACCGGCGCCGGGCTACACCACCGCCGACCTCGGAGGCTCCTTCGACGTGAACGATTCGCTGACCCTCAACGCCTCCCTCA ACAACCTCACCGACAAGCGCCTGGACGATGAAACCTATGGCACGGTGAACTACGGCCGCACCCTGTGGATGGGCGCCACG CTCAACTTCTAA Protein sequence : MLAASRFSPLALLVAGSLNAHADEPLALNDVVVTASGFAQSVEDAPASVTVIDGEALRRKSYRDLGDAVRDVEGVTVNGG ANETDISIRGMPADYTLIMVDGKRQSARESRVNGNSGYEQSFVPPAAAIERIEVVRGPMSSLYGSDAIGGVINVITRKVS PTWGGSVGYDYSARQHSDQGNARQTQFYLSGPLKEDFLGLQVWGRYLDRQADDDIEQTNGFSKADHRDLTARLAFTPTLD HDILLEAGATRLKNGDGMSANWATREQENNRDHWSLSHQGRWGWATSDVALSQETSSREGKATPEQTDIYGRKPEIKNTV FDAKLVVPTAHNVSTVGLQWNESELTDWNQGLGDRVDYKFSVVQKALFAENEWSMTDNFALTTGLRLDEHEEYGAHLSPR VYGVWRATEQWTLKGGIARGFKAPELRAVVEDYAYLRRNRFVMFGNPDLKPETSTNYEVSALWSNRDNLSAGVTLFYNDF QDKLSTVTTDRRWNTYTIMERVNVDKAIIQGVELNGQWDISPSVLLKANYTYTDSEQKSGANKGAPLALTPEQKANVRSE WTINDRTQAWVSLSYYGEETGNTITDEPAPGYTTADLGGSFDVNDSLTLNASLNNLTDKRLDDETYGTVNYGRTLWMGAT LNF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ireA | AAZ04447.1 | iron-regulated outer membrane protein | Virulence | PAI I APEC-O1 | Protein | 1e-88 | 43 |
| ireA | YP_854314.1 | iron-regulated outer membrane virulence protein | Virulence | PAI I APEC-O1 | Protein | 2e-88 | 43 |
| unnamed | AAL67402.1 | IrgA-like protein | Virulence | PAI II CFT073 | Protein | 4e-89 | 42 |
| c5174 | NP_757022.1 | iron-regulated outer membrane virulence protein | Not tested | PAI II CFT073 | Protein | 5e-89 | 42 |
