Gene Information

Name : PFLU3547 (PFLU3547)
Accession : YP_002873109.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 3933515 - 3934990 bp
Length : 1476 bp
Strand : -
Note : -

DNA sequence :
ATGACCACACCACAACACGCGCTACCGGCACAAACCGCTGATGAATACAGCATCCTCGACAACATCGTTGCCCAGACGCT
ACTGAGTGCCGATGACGAAGCGTATGGCATTGCCAAACGGGGTGTCTCGGCGTTTATCGAAGAGTTGATCAAGCCGCAGA
ACCGTGGCGAGCCGGTAAAAAAACGCTTGGTCGACCGGATGATTGCCGAGATCGACACCAAGCTCAGTCTGCAAATGGAC
GAGATATTGCACCACCCGGACTTTCAGGCCCTGGAAGCGTCCTGGAAAGGGCTCCAGTTGTTGGTGGATCGCACCGACTT
TCGCGAAAACATCAAGATCGAACTCTTGAACGTTTCCCGGCAAGACCTGCTGGAAGACTTCGAAGACTCACCGGAAGTGA
CCCAGTCGGGCTTGTACAAACATATCTACAGTGCTGAATACGGCCAGTTTGGCGGTCAGCCTGTGGGCGCGATCATTGCC
AACTATTTTCTGTCGCCCAGCGCGCCTGATGTAAAGCTGATGCAATACGCTTCCAGTGTGGCTTGCATGGCGCATGCGCC
CTTTATCGCCGCAGCCGCGCCAGCGTTCTTCGGGTTGGAGAGCTTCACCGGCTTACCGGATCTCAAAGATCTGAAGGACC
ATTTCGAAGGCCCGCAATTTGCCAAATGGCAAAGCTTTCGCCAGAGCGAGGACGCGCGTTACATCGGGTTGACCGTGCCG
CGTTTCTTGCTCCGTACGCCTTATGACCCCCTCGAATGCCCGGTCAAGACCTTTGCCTACCAGGAAAACGTGGTCAACAG
CCACGAACATTACCTGTGGGGCAATACAGCCTACGCCTTTGCCACGCGCCTGACCGATAGCTTCGCGCGCTTTCGCTGGT
GCCCGAACATCATCGGCCCGCAAAGCGGTGGCGCGGTAGAAGACTTGCCGTTGCATCACTTCCACAGCATGGGGGAGATT
GAAACCAAGATCCCGACCGAAGTGCTGGTTTCCGACCGTCGTGAATACGAACTGGCGCAAGAGGGCTTCATTGCCTTGAC
GATGCGCAAGGGCAGTGACAACGCCGCGTTCTTCTCTGCCAGCTCGGTACAAAAGCCGAAACACTTCGGCCTCAGCCCCG
AGGGCAAGGAAGCAGAGCTGAATTACCGCTTGGGAACACAGTTGCCCTACATGATGGTGGTCAATCGCCTGGCCCATTAC
CTCAAGGTCCTTCAGCGCGAACAACTGGGTTCATGGAAGGAGCGCACCGACCTGGAGCTGGAGCTCAATAAATGGATTCG
CCAGTACGTCGCCGACCAGGAAAACCCCAGTGCCGAAGTGCGCGGGCGGCGCCCCTTGCGCGCAGCACGCATCGTTGTCA
GTGATGTCGAGGGTGAGCCTGGCTGGTATCGCGTCAACCTGAGTGTGCGACCGCACTTCAAGTACATGGGGGCGGATTTC
ACGCTGTCCCTGGTTGGCAAGCTCGATAAAGAATGA

Protein sequence :
MTTPQHALPAQTADEYSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVKKRLVDRMIAEIDTKLSLQMD
EILHHPDFQALEASWKGLQLLVDRTDFRENIKIELLNVSRQDLLEDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAIIA
NYFLSPSAPDVKLMQYASSVACMAHAPFIAAAAPAFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP
RFLLRTPYDPLECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGPQSGGAVEDLPLHHFHSMGEI
ETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSASSVQKPKHFGLSPEGKEAELNYRLGTQLPYMMVVNRLAHY
LKVLQREQLGSWKERTDLELELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVEGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-154 63
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 3e-154 63
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 1e-148 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU3547 YP_002873109.1 hypothetical protein VFG2093 Protein 1e-173 69
PFLU3547 YP_002873109.1 hypothetical protein VFG2475 Protein 2e-160 65
PFLU3547 YP_002873109.1 hypothetical protein VFG2070 Protein 9e-79 42