Gene Information

Name : PFLU3407 (PFLU3407)
Accession : YP_002872974.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Resistance
Product : putative cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 3767631 - 3768797 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCAGTCCGATAAAAGCGCGTTTGCCACCCGCGTGATCCACGCCGGGCAATTTCCCGACCCGACCACTGGCGCGCT
GATGCCACCGATCTACGCGAACTCCACCTACCTGCAAGACAGCCCCGGTGTGCACAAGGGCTTCGATTACGGCCGCTCCC
ACAACCCCACGCGGTTTGCCCTGGAGCGCTGCGTGGCCGACCTCGAAGGCGGCAGCCAGGCGTTTGCCTTCGCATCCGGG
CTGGCGGCGATCTCGACGGTGCTGGAGCTGTTGGATGCCGGCGCCCACATCGTCTCCGGCAATGACCTATACGGCGGCAC
CTTCCGCCTGTTCGACAAGGTGCGCCAACGCAGCGCCGGGCACCGCTTCAGCTTTGTCGACCTGAGTGATGTGTCGGCAT
TTGAAGCGAGCTTGCAGGACGACACCCGCATGGTCTGGGTCGAGACCCCCAGTAACCCGCTGCTGAGTCTCACCGACCTC
AGCGCCATTGCCCGCATCTGCCGCGATCGAGGCATCATCTGCGTGGCCGACAACACCTTCGCCAGCCCGTGGATCCAGCG
CCCGCTGGAGCTGGGTTTTGACGTGGTGGTGCACTCTACGACCAAGTACCTCAACGGCCACTCCGATGTGATCGGCGGTA
TTGCCATTGTCGGCGATAACCCCGAACTGGCCGAACGTCTGGGTTTCCTGCAGAACTCGGTCGGCGCCATCGCCGGCCCC
TTCGATGCCTTCCTCACCCTGCGCGGCGTGAAAACCCTGGCGCTGCGCATGGAGCGCCATTGCAGCAACGCCCTCGACCT
GGCCACCTGGCTGGAGCAGCAACCGCAAGTGGCGCGGGTTTACTACCCCGGCCTCACGTCCCACCCGCAGCATGCACTGG
CGCGCCAACAGATGCGCGGCTTTGGCGGGATGATCTCGATTGACCTGAACAGCGACCTGGCCGGCGCCACGCGCTTCCTG
GAAAACGTCAAGATCTTCGCCCTGGCCGAAAGCCTCGGCGGCGTGGAAAGCCTGATCGAGCACCCAGCGATCATGACCCA
TGCAAGCATCCCGGCGGCCACGCGGGCGCAGTTGGGGATTGGCGATGGGTTGGTGCGGTTGTCGGTGGGGGTTGAGGATG
TGGAAGACCTGCGCGCCGACCTGGCGCAGGCGTTGGCACGCATCTAA

Protein sequence :
MSQSDKSAFATRVIHAGQFPDPTTGALMPPIYANSTYLQDSPGVHKGFDYGRSHNPTRFALERCVADLEGGSQAFAFASG
LAAISTVLELLDAGAHIVSGNDLYGGTFRLFDKVRQRSAGHRFSFVDLSDVSAFEASLQDDTRMVWVETPSNPLLSLTDL
SAIARICRDRGIICVADNTFASPWIQRPLELGFDVVVHSTTKYLNGHSDVIGGIAIVGDNPELAERLGFLQNSVGAIAGP
FDAFLTLRGVKTLALRMERHCSNALDLATWLEQQPQVARVYYPGLTSHPQHALARQQMRGFGGMISIDLNSDLAGATRFL
ENVKIFALAESLGGVESLIEHPAIMTHASIPAATRAQLGIGDGLVRLSVGVEDVEDLRADLAQALARI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-80 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-81 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-55 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU3407 YP_002872974.1 putative cystathionine gamma-synthase BAC0207 Protein 9e-71 45