Gene Information

Name : PFLU2961 (PFLU2961)
Accession : YP_002872541.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 3234118 - 3235401 bp
Length : 1284 bp
Strand : -
Note : -

DNA sequence :
ATGCTTGTCGCAATTGGCATTTTCATCTTCACCATCGTACTGGTCATCTGGCAGCCCAAGGGCTTGGGCGTCGGCTGGAG
TGCAACAATGGGCGCCATCCTGGCCCTGGCCTCTGGCGTGATCAGCCTGGCCGACATCCCGGTGGTGTGGCACATCATCT
GGAATGCCACCGGGACCTTTGTCGCGTTGATCATCATCAGCCTGCTGCTGGACGAGGCCGGCTTCTTTGCCTGGACCGCC
TTGCACGTCGCGCGCTGGGGCCGTGGCCGCGGCCGTCGCCTGTTTGCTTATATGGTGTTGCTCGGCGCGCTGGTGTCGGC
CCTGTTCGCCAATGACGGCGCGGCGCTGATCCTTACGCCGATCGTGATGTCGATGCTGTTGGCCCTGCGCTTCTCCCCGG
CAGCGACCCTGGCATTCGTCATGGGCGCAGGCTTTATCGCCGACACCGCAAGCCTGCCGCTGGTGGTGTCGAACCTGGTC
AATATCGTCTCGGCGGACTATTTCAAGATCGGCTTCAACGAATACGCGGCGGTGATGGTGCCGGTCAACTTTGTCAGCGT
CGCAGCTACGCTGGCGGTGTTGCTGTGGTTCTTCCGTCGCGATATCCCCCAGACCTACGACCCAGCCGACCTCGAAGACC
CCGCCAGCGCCGTCCACGACCGCGCCACCTTCCGCGCCGGCTGGTGGGTGCTGGGCATCCTGCTGGTCGGTTGCTTCGCC
CTGGAGCCGCTGGGCATTCCCATCAGCGCGATTTCCGCCGTCTGCGCCGTGCTCCTGCTGGTGATCGCCGCCAAGGGCCA
CAAGATCTCCACACGCAAAGTGCTGAAGGAAGCACCGTGGCAGATCGTAATCTTTTCGCTCGGGATGTACCTGGTGGTGT
ACGGCTTGCGTAACGCCGGCCTCACCACCTACCTGGCGACCTGGCTCGACACCTTCGCCACTTACGGCGTGTGGGGCGCA
GCCATGGGCACAGGGGTGCTGACGGCGCTGTTATCCTCGGCGATGAACAACTTGCCGACGGTGTTGATCGGCGCGCTGTC
CATCGAGTCCAGCCATGCCGTGGGCGTGGTCAAGGACGCGATGATCTACGCCAACGTCATCGGCAGCGACCTGGGCCCGA
AAATCACCCCGATCGGCAGCCTGGCCACGTTGCTGTGGCTGCATATTCTTGCGCGCAAGGGCATCACCATCACCTGGGGC
TACTACTTCAAGGTCGGCATCGTACTGACGTTGCCGGTGTTGTTGATCACCCTTGCCGCCCTCGCCGTGCGCCTGAGTGT
CTGA

Protein sequence :
MLVAIGIFIFTIVLVIWQPKGLGVGWSATMGAILALASGVISLADIPVVWHIIWNATGTFVALIIISLLLDEAGFFAWTA
LHVARWGRGRGRRLFAYMVLLGALVSALFANDGAALILTPIVMSMLLALRFSPAATLAFVMGAGFIADTASLPLVVSNLV
NIVSADYFKIGFNEYAAVMVPVNFVSVAATLAVLLWFFRRDIPQTYDPADLEDPASAVHDRATFRAGWWVLGILLVGCFA
LEPLGIPISAISAVCAVLLLVIAAKGHKISTRKVLKEAPWQIVIFSLGMYLVVYGLRNAGLTTYLATWLDTFATYGVWGA
AMGTGVLTALLSSAMNNLPTVLIGALSIESSHAVGVVKDAMIYANVIGSDLGPKITPIGSLATLLWLHILARKGITITWG
YYFKVGIVLTLPVLLITLAALAVRLSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 5e-135 74
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-101 55
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-98 53
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-102 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU2961 YP_002872541.1 arsenical pump membrane protein BAC0031 Protein 2e-132 73
PFLU2961 YP_002872541.1 arsenical pump membrane protein BAC0578 Protein 1e-132 72
PFLU2961 YP_002872541.1 arsenical pump membrane protein BAC0576 Protein 3e-133 72
PFLU2961 YP_002872541.1 arsenical pump membrane protein BAC0577 Protein 1e-128 71
PFLU2961 YP_002872541.1 arsenical pump membrane protein BAC0574 Protein 3e-102 54
PFLU2961 YP_002872541.1 arsenical pump membrane protein BAC0575 Protein 4e-102 54