Gene Information

Name : PFLU2748 (PFLU2748)
Accession : YP_002872330.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : putative thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 3031609 - 3032109 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCCAAGTCACTCTTCGTGGTAACCCCGTCCAGGTTGAAGGCGAACTGCCGAAAACCGGTTCCACCGCCCCTGAGTT
CAGCCTTGTCGCTGTCGACCTGTCGGAAGCTTCCCTGGAAACGTTCGCCGGTAAGCGCAAAGTACTGAACATCTTCCCAA
GCGTTGATACCCCGACCTGCGCCACCTCGGTGCGCAAGTTCAACGCCCAGGCCAACGACGTGAGCAACACTGTCGTGCTG
TGCATCTCGTCTGACCTGCCGTTCGCCCAGAAGCGTTTCTGCGGCACCGAAGGCCTGGACAACGTGCTGAGCCTGTCGGA
CTTCCGCAACGCCGACTTCGCTGTTGACTACGGTGTGTCTCTCGCCGACGGCCCATTGCAAGGCCTGACCGCCCGTGCCG
TCGTGGTATTGGACGAAAACAACAACGTGCTGCACAGCGAACTGGTCAGCGAAATCGGCCAGGAGCCGAACTACGAAGCA
GCCCTGGCTGTTTTGAAGTAA

Protein sequence : 
MAQVTLRGNPVQVEGELPKTGSTAPEFSLVAVDLSEASLETFAGKRKVLNIFPSVDTPTCATSVRKFNAQANDVSNTVVL
CISSDLPFAQKRFCGTEGLDNVLSLSDFRNADFAVDYGVSLADGPLQGLTARAVVVLDENNNVLHSELVSEIGQEPNYEA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 5e-35 47
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 5e-35 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-35 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-35 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU2748 YP_002872330.1 putative thiol peroxidase VFG0087 Protein 1e-35 47