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Name : PFLU2647 (PFLU2647) Accession : YP_002872233.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Virulence Product : putative Orn/Arg/Lys decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : - Position : 2919093 - 2921348 bp Length : 2256 bp Strand : + Note : - DNA sequence : ATGTACAAAGACCTGAAGTTCCCCGTCCTTATCGTGCACCGCGATATCAAGGCCGACACCGTCGCCGGTGACCGGGTCCG AGGCATCGCTCGAGAGCTGGAACAGGAGGGCTTCAGTATTTTCTCGGCAGTGGACTACGCCGAGGGCCGGCTGGTGGCCT CCACCCATCATGGCCTGGCGTGCATGCTGATCGCCGCCGAAGGCGCGGGCGAGAATACCCATCTGTTGCAGAACATGGTC GAGCTGATCCGGCTCGCGCGGCTGCGGGCGCCGAATCTGCCGATCTTTGCCTTGGGCGAGCAAGTCACCCTGGAAAATGC GCCGGCTGACGCCATGAGCGAGCTTAACCAGCTGCGCGGCATTCTGTACCTGTTCGAAGACACCGTGCCGTTTCTCGCCC GGCAAGTTGCCCGTGCGGCGCGCACTTACTTGGATGGCCTGTTGCCGCCGTTCTTCAAGGCACTGGTGCAGCACACCGCT GATTCCAACTATTCCTGGCACACCCCCGGCCATGGCGGCGGCGTGGCCTACCGCAAAAGCCCGGTGGGGCAGGCGTTTCA TCAATTTTTCGGGGAAAATACCCTGCGTTCGGACTTATCGGTGTCGGTGCCCGAGCTGGGCTCGCTGCTGGACCACACCG GGCCGCTGGCCGAAGCCGAGGCCCGCGCCGCCCGCAACTTTGGCGCTGACCACACTTTCTTCGTGATCAACGGCACGTCC ACCGCCAACAAGATCGTGTGGCATTCCATGGTCGGGCGCGATGACCTGGTGCTGGTGGACCGCAACTGTCACAAGTCGGT GTTGCACTCGATCATCATGACCGGCGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTGGGGATCATCGGCCCGA TTCCCTTGAGCGAATTCAGCCCCGAGTCGATCCGCGCCAAGATCGACGCCAGCCCGTTGACCCGTGGCCGGGCGCCCAAG GTCAAGATGGCGGTGGTCACCAATTCCACCTATGACGGCCTGTGCTACAACGCCGAGCTGATCAAGCAGCAATTGGGCAA CAGCGTCGAGGTGCTGCATTTTGATGAGGCCTGGTACGCCTACGCGGCGTTTCATGAATTCTTCGCCGGGCGCTACGGCA TGGGCACTTCGCGCACGCCGGACAGCCCGCTGGTGTTCACCACCCACTCCACCCATAAACTGCTGGCCGCGTTCAGCCAG GCCTCGATGATCCACGTGCAGGACGGCGGCGCGCGTCAGTTGGACCGTGACCGTTTCAACGAAGCCTTCATGATGCATAT CTCGACGTCGCCGCAGTACAGCATCATTGCTTCGCTGGATGTGGCCTCGGCGATGATGGAAGGTCCGGCCGGGCGTTCGC TGTTGCAGGAAATGTTCGACGAAGCCCTGAGCTTCCGTCGGGCGCTGGCCAACCTGCGCCAGCACATTGCCGCCGAGGAT TGGTGGTTCACCATCTGGCAACCGCCGTCGGTGGCGGGCATCGACCGCGTCGTCACCGCTGATTGGCTGTTGCATCCCCA GGCTGACTGGCATGGCTTTGGCGAGGTCGCCGAGGACTACGTGCTGTTGGACCCGATCAAAGTGACGCTGGTGATGCCCG GCCTCAACGCCGGCGGCGCCCTGAGCGATTGCGGGATTCCGGCTGCCGTGGTCAGCAAGTTCCTCTGGGAGCGTGGTCTG GTGGTGGAAAAGACCGGGTTGTATTCCTTCCTCGTGCTGTTCTCCATGGGTATTACCAAAGGCAAATGGAGTACCTTGCT CACCGAATTGCTGGAGTTCAAGCGCAGCTACGACGCCAATGTGAGCCTGGCCAGTTGTTTGCCATCGGTGTTTGCCCAAG GCCCCACGCGCTATCAAGGCCTGGGCCTGCGCGACCTGTGCGACCAACTGCATAGCTGTTACCGTAGCAACGCCACTGCA AAGCACCTTAAACGGATGTATACCGTTCTGCCGGAAATCGCGATGAAACCCGCCGATGCCTACGACCAGTTGGTCAGGGG TGAAGTGGAAGCGGTTTCCATCGATGCCTTGCCAGGGCGCATCGCAGCCGTGATGCTGGTGCCTTATCCGCCCGGTATTC CACTGATCATGCCGGGCGAGCGCTTCACCGAGTCGACGCGTTCGATTATCGACTACCTGGCCTTTGCCCGGACGTTCGAT AGCAGTTTCCCCGGTTTTGTCGCCGATGTTCATGGGTTACAACACGAAGATGACGGCAGTGGTCGTTGTTACACCGTCGA TTGCATCAAGGGTTAA Protein sequence : MYKDLKFPVLIVHRDIKADTVAGDRVRGIARELEQEGFSIFSAVDYAEGRLVASTHHGLACMLIAAEGAGENTHLLQNMV ELIRLARLRAPNLPIFALGEQVTLENAPADAMSELNQLRGILYLFEDTVPFLARQVARAARTYLDGLLPPFFKALVQHTA DSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS TANKIVWHSMVGRDDLVLVDRNCHKSVLHSIIMTGAIPLYLCPERNELGIIGPIPLSEFSPESIRAKIDASPLTRGRAPK VKMAVVTNSTYDGLCYNAELIKQQLGNSVEVLHFDEAWYAYAAFHEFFAGRYGMGTSRTPDSPLVFTTHSTHKLLAAFSQ ASMIHVQDGGARQLDRDRFNEAFMMHISTSPQYSIIASLDVASAMMEGPAGRSLLQEMFDEALSFRRALANLRQHIAAED WWFTIWQPPSVAGIDRVVTADWLLHPQADWHGFGEVAEDYVLLDPIKVTLVMPGLNAGGALSDCGIPAAVVSKFLWERGL VVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDANVSLASCLPSVFAQGPTRYQGLGLRDLCDQLHSCYRSNATA KHLKRMYTVLPEIAMKPADAYDQLVRGEVEAVSIDALPGRIAAVMLVPYPPGIPLIMPGERFTESTRSIIDYLAFARTFD SSFPGFVADVHGLQHEDDGSGRCYTVDCIKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 3e-131 | 43 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 8e-128 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PFLU2647 | YP_002872233.1 | putative Orn/Arg/Lys decarboxylase | VFG1670 | Protein | 1e-131 | 43 |
