|
Name : PFLU2631 (PFLU2631) Accession : YP_002872218.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : putative ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2900568 - 2902139 bp Length : 1572 bp Strand : - Note : - DNA sequence : ATGAACCTGATCGAAATCCGCGACCTCAACGTCGCTTTCAGTGGCCAGACCGTGGTCCGCCACCTGAGCCTGGACGTTCG CCCCGGCGAGTGCCTGGCGCTGGTGGGTGAGTCGGGCTCGGGCAAGTCGGTGACGGCCCATTCGATCCTGCAACTGCTGC CGGAAGCGGGCACCGACACCACCGGCTCCATCACGTATCGCGGCCAGGAGTTGATCGGCGCCTCGGCCTCGACGTTGCAG AAACTGCGCGGTGACCGCATTGCGATGATCTTCCAGGAGCCGATGACCTCCCTGAACCCGCTGCACAGCATCGAAAAGCA GATCGGCGAAACCCTGCTGCTGCACAAGGGCTTGGGCGGCAAGGCGGCGCAGGCGCGCATCCTCGAATTGCTCGAGCTGG TGGGCATCCAGAAACCCCAGGAACGCCTCAAGGCTTATCCGCATCAATTGTCCGGCGGCCAACGCCAACGGGTGATGATC GCCATGGCCCTGGCCTGCGAGCCGGAGCTGTTGATCGCCGACGAACCCACCACCGCCCTGGATGTGACCGTGCAGCGCAA GATCCTGCTGCTGCTCAAATCCCTGCAACAACGCCTGGGCATGTCGCTGCTGCTGATCAGCCATGACCTCAACCTGGTGC GCAGCATCGCCCAGCGCGTCTGCGTCATGCGCGCCGGCGAGATCGTTGAGCAGGCCGACTGTGAGACCTTGTTCACCGCG CCGCAGCATCCTTACAGCCAGTTGCTGCTGGATGCGGAACCGGCCGGTGATGCGCTGTGCAGCGATGCGCGCGAGACGGT GTTGCAAGTGGATGACCTGACCGTGCAATTCCCCCTTGGCGGCGGGTTGTTCCGCCGCAAGACCTACCTGCGTGCGGTGG ACGGCATCAGCCTCAGCGTGCAGCGCGGCAAAACCCTGGGGATTGTCGGCGAGTCCGGCTCGGGCAAGTCCACGCTGGGC CAAGCGATCCTGCGTTTGCTCGACTCCACCGGCAGCATCCGCTTCCAAGGCGAAGCGCTCGACCCGTTGAATAACCAGCA AATGCGCCCTTGGCGCAAGCAGATGCAGGTGGTGTTCCAGGACCCCTACGGCAGCCTCAGCCCACGCATGACCGTGGAAC AGATCATCAGCGAAGGTCTGGACGTGCACGCGCCGTGCAGCCTGGCCGACCGCGATGCGCAGGTGATCCAGGTGCTCAAG GACGTCGGCCTCGACCCTGCCAGTCGCCACCGCTACCCGCATGAATTTTCCGGTGGGCAGCGCCAACGCATCGCCATCGC TCGCGCCTTGGTACTCAAGCCGGCGCTGATGCTGCTGGATGAACCGACCTCGGCCCTCGACCGCACCGTGCAGAAGCAAG TGGTGGCATTGCTGCGTGAGCTGCAGGAGAAATACGGCCTGACCTACCTGTTTATCAGCCATGACCTGGCCGTGGTGCGG GCCATGGCCCATGACATGATTGTGGTCAAGGACGGTAAGGTGGTGGAGCGCGGCGCCAGCCATGAGGTGTTCGATGCACC GCAACACCCGTACACCCAAGAGCTGCTGGCAGCGGCGCACATCCCCTTGTAA Protein sequence : MNLIEIRDLNVAFSGQTVVRHLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGTDTTGSITYRGQELIGASASTLQ KLRGDRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKGLGGKAAQARILELLELVGIQKPQERLKAYPHQLSGGQRQRVMI AMALACEPELLIADEPTTALDVTVQRKILLLLKSLQQRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCETLFTA PQHPYSQLLLDAEPAGDALCSDARETVLQVDDLTVQFPLGGGLFRRKTYLRAVDGISLSVQRGKTLGIVGESGSGKSTLG QAILRLLDSTGSIRFQGEALDPLNNQQMRPWRKQMQVVFQDPYGSLSPRMTVEQIISEGLDVHAPCSLADRDAQVIQVLK DVGLDPASRHRYPHEFSGGQRQRIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLRELQEKYGLTYLFISHDLAVVR AMAHDMIVVKDGKVVERGASHEVFDAPQHPYTQELLAAAHIPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-81 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 6e-81 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-81 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-81 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-94 | 43 |
