Gene Information

Name : PFLU2483 (PFLU2483)
Accession : YP_002872080.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 2697009 - 2698538 bp
Length : 1530 bp
Strand : -
Note : -

DNA sequence :
ATGACTTTGCATCCAAATCTCGATCAATTAAACCCTGAACAACTGCGTGCCCTGGCGGCGCAGTTGATCCAGCGCGTCGA
GACAATGGACAAGCAAATCACTCATCACAAGTCGGTCAACGAGAAACTGGCCCACGAGATCGCGCTGCTCAAACGCTTCA
AGTTTGCCAAGCGCAGCGAGCAGTTGAGCCCGGATCAAGCCAGCCTGCTCGACGACTTGATCGATACGGATATCGCCGCT
ATCGAAGCCGAACTTGAGGCGCTGCAACCGGCACCTGTCGAAGCCAAAGTGCGCCAGCAACCCAAGCGCGCACCGCTGCC
ACCGCAGTTTCCTCGCACACTGATCCATCACGAACCGGACAACAGCCACTGCCAGTGCGGCTGCGCCCTCAAGCGCATCG
GCGAAGACGCCAGCGAAAAGCTCGACTACACGCCCGGCGTATTCACCGTCGAGCGTCACATCCGTGGAAAGTGGGCCTGC
GAGCAGTGTGAAACGCTAATCCAGGCGCCGGTACCGGCGCACGTCATCGACAAAGGCGTCCCGACCGCAGGCCTGCTGGC
CCACATCATGGTGGCCAAGTTCGCCGACCATCTGCCGCTGTATCGCCAAGAGAAAATCTTCGGCCGCGCCGGGCTGCCCA
TCGCCCGTTCGACACTGGCGCAGTGGGTGGGTCAAACCGGCGTACAACTGCAACCGCTCGTGGAAGCAATGCGCGAGGCA
GTGCTGGCCCAGCGAGTCGTCCATGCCGATGAAACACCCGTGCAGATGCTGGCACCGGGTGAAAAGAAAACGCACCGAGC
GTATGTCTGGGCCTACTGCACGACACCATTCTCGGCACTGAAGGCGGTAGTCTACGACTTCAGCCCGAGCCGTGCTGGCG
AACATGCGCGCAACTTCCTGGGCACTTGGAACGGCAAGCTGGTCTGCGATGGCTTCGCAGGCTACAAGGCCGGCTTCGAA
GGGGGCATCACCGAAATCGGCTGCATGGCCCATGCTCGCCGCAAGTTCTTCGACCTGCATGTGGCGAACAAAAGCCAACT
GGCCGAACAGGCGCTGCACTCAATCGGCGGCCTATACGAGGTTGAACGAAAGGCCAAAGAGATGAGCGATGAAGATCGCT
GGCGATTACGTCAAGAAATGGCGATTCCTATCGCGGAGAAGTTGCATGAGTGGATGCTGGCTAAGCGCGAACTTGTGCCC
GAGGGCTCGGCCACAGCCAAGGCTCTGGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTCAATGATGGTGC
TGTGCCCATCGACAACAATCGGGTCGAAAATACGATCCGGCCTTGGGCCCTTGGCCGTTCGAATTGGCTCTTCGCCGGAT
CACTGCGCAGCGGTAAACGAGCGGCGGCAATTATGAGCTTGATTCAATCGGCACGCATGAATGGGCATGATCCGTTCGCG
TATCTCAAGGATGTACTGACGCGGTTGCCGACACAGAGGGCCAGTGCAATTGACCAATTACTACCGCATCAATGGGCACA
GGGCTCCTAA

Protein sequence :
MTLHPNLDQLNPEQLRALAAQLIQRVETMDKQITHHKSVNEKLAHEIALLKRFKFAKRSEQLSPDQASLLDDLIDTDIAA
IEAELEALQPAPVEAKVRQQPKRAPLPPQFPRTLIHHEPDNSHCQCGCALKRIGEDASEKLDYTPGVFTVERHIRGKWAC
EQCETLIQAPVPAHVIDKGVPTAGLLAHIMVAKFADHLPLYRQEKIFGRAGLPIARSTLAQWVGQTGVQLQPLVEAMREA
VLAQRVVHADETPVQMLAPGEKKTHRAYVWAYCTTPFSALKAVVYDFSPSRAGEHARNFLGTWNGKLVCDGFAGYKAGFE
GGITEIGCMAHARRKFFDLHVANKSQLAEQALHSIGGLYEVERKAKEMSDEDRWRLRQEMAIPIAEKLHEWMLAKRELVP
EGSATAKALDYSLKRWVALTRYLNDGAVPIDNNRVENTIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPFA
YLKDVLTRLPTQRASAIDQLLPHQWAQGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 0.0 82
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 2e-132 50
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-62 41
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU2483 YP_002872080.1 putative transposase VFG1700 Protein 5e-63 41