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Name : xylA (PFLU2301) Accession : YP_002871909.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 2503459 - 2504775 bp Length : 1317 bp Strand : - Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGCCGTACTTCCCCGGTGTCGAGAAGGTTCGCTTTGAAGGCCCCAGCAGCGACGCCCCCCTCGCCTTTCGCCATTACGA CGCCAACAAGATCATCCTCGGCAAACCCATGCGCGAACACCTGCGCATGGCAGCCTGCTATTGGCACACCTTCGTATGGC CGGGGGCGGATATGTTCGGTGTAGGCACCTTCAAGCGGCCCTGGCAGCGCAGCGGCGACCCGATGGAACTGGCCATCGGC AAGGCCGACGCGGCGTTCGAATTTTTCTCCAAACTGGGCATCGACTACTACAGCTTTCACGACACGGACGTCGCCCCTGA AGGCAGCTCGCTCAAGGAGTACCGCCACCACTTCGCGCAGATGGTCGATCACCTCGAGCGCCATCAGGAACAGACCGGGA TCAAGCTGCTCTGGGGCACCGCCAATTGCTTCAGCAACCCGCGCTTTGCCGCCGGCGCCGCGAGTAACCCGGACCCGGAG GTGTTCGCCTACGCCGCCGCCCAGGTGTTCAGCGCCATGAATGCCACCCTGCGGCTCAAGGGCGCCAACTATGTGCTGTG GGGTGGCCGTGAAGGCTATGAAACCCTGCTCAATACCGACCTCAAGCGCGAACGCGAGCAACTCGGGCGCTTCATGCGCA TGGTGGTGGAGCACAAGCATAAGATCGGCTTCAAGGGCGACCTGCTGATTGAGCCCAAGCCCCAGGAACCGACCAAGCAC CAATACGATTACGACAGCGCCACGGTGTTCGGCTTCCTGCATGAGTACGGGCTGGAGCATGAGATCAAGGTGAACATCGA GGCCAACCACGCCACCCTGGCCGGGCACAGCTTCCATCACGAGATCGCCACGGCCGTGTCCCTGGGTATCTTCGGCAGCA TCGACGCCAACCGCGGCGACCCGCAGAACGGCTGGGACACCGACCAGTTCCCCAACAGCGTCGAGGAAATGACCCTGGCC ACCTATGAAATCCTCAAGGCCGGCGGGTTCAAGAACGGTGGCTACAATTTCGACTCCAAGGTGCGCCGCCAAAGCCTGGA CGATGTGGACCTGTTCCACGGGCATGTCGCGGCCATGGATGTGCTGGCCCTGGCGCTGGAACGTGCGGCGGCGATGGTGC AGAACGACCGCTTGCAGCAGTTCAAGGACCAGCGTTATGCCGGGTGGCAGCAACCGTTGGGCCAGGCAGTGCTGGCCGGA GAGTTCAGCCTGGCATCGCTGGCCGAGCATGCGTTTGCCCATGAACTGAACCCGCAGGCGGTGAGTGGTCGTCAGGAGAT GCTTGAAGGCGTCGTGAATCGCTTTATCTACACCTGA Protein sequence : MPYFPGVEKVRFEGPSSDAPLAFRHYDANKIILGKPMREHLRMAACYWHTFVWPGADMFGVGTFKRPWQRSGDPMELAIG KADAAFEFFSKLGIDYYSFHDTDVAPEGSSLKEYRHHFAQMVDHLERHQEQTGIKLLWGTANCFSNPRFAAGAASNPDPE VFAYAAAQVFSAMNATLRLKGANYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKHKIGFKGDLLIEPKPQEPTKH QYDYDSATVFGFLHEYGLEHEIKVNIEANHATLAGHSFHHEIATAVSLGIFGSIDANRGDPQNGWDTDQFPNSVEEMTLA TYEILKAGGFKNGGYNFDSKVRRQSLDDVDLFHGHVAAMDVLALALERAAAMVQNDRLQQFKDQRYAGWQQPLGQAVLAG EFSLASLAEHAFAHELNPQAVSGRQEMLEGVVNRFIYT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 3e-100 | 48 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 2e-100 | 48 |
