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Name : PFLU0214 (PFLU0214) Accession : YP_002869907.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Virulence Product : putative sigma-54 dependent regulatory protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 239821 - 240741 bp Length : 921 bp Strand : + Note : - DNA sequence : ATGAGCCTGCATGAAACCTACGGCCAGCCACTGCTGACCTTCCCCGACGCGGAAAAAAGCCCGCTGAGCATTCGCGCCAA AGCGTTGGTCTTTGTTGATCCACGCTCGCGGCAACTGCGCGAAGACCTGGAAAGCCTCGCGCCGCGCGCCCTGCCGGTGT TGATTCGCGGCGAAACCGGCAGCGGTAAAGAGCTGCTGGCGCGGCACATCCACCGTGGCAGCGACCGCACCGGGCTGTTT GTCTCGGTCAATTGCGGCGCCATCAGCCCGACCTATGCCGATGCCGAGTTGTTCGGTTATGCGGCCGGTGCCCACAGTGG CGCGGCCAGCAGCCGGGCGGGGTGGTTCGGTTCGGCGAATGGCGGCACCTTGTACTTGGATGAGATCGGCGACTTGCCGC TACCGATCCAGGTAAAACTGCTGGCCGCGCTGGAAAACCATGAAGTCACCCGCGTCGGCGCCCATCAGCCCAGCCCGGTG GATGTGCGTCTGGTAGCAGCCACCAGCATCGACTTGGCCCAGGCCGTGGCCGCCGGCAAGTTCCATGAGCGCTTGTTTCA TTACCTGAGCGAAGGCCAGCTGGACTTGCCCGCCTTGCGCGAGCGTGTCGGTGACATCCTGTCCCTGGCCGAGTATTTCC TGGGCATCTACAGCCAGCGCCTGGACCTGCCGGTGCCGCTGATCAGCGACGCCGCCCAGCGCGTGCTGGAGCACCACACC TGGCCGGGCAATACGCGTGAGCTGGAAAACGTTATTCACTTTGCATTGCTGGTCAGCAGCGGCGACGAGATTTTGCCCGA GCATCTGAATTTGCCTGTGGGGGGCACGCCGTTGGAGCAGGTACAGCGAATTTTCAACACGGCCAGCCCCGCCGAGCAGG AAGCCTTGCGCAGCTTTCTACGTGAACAAGCAACTACATGA Protein sequence : MSLHETYGQPLLTFPDAEKSPLSIRAKALVFVDPRSRQLREDLESLAPRALPVLIRGETGSGKELLARHIHRGSDRTGLF VSVNCGAISPTYADAELFGYAAGAHSGAASSRAGWFGSANGGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAHQPSPV DVRLVAATSIDLAQAVAAGKFHERLFHYLSEGQLDLPALRERVGDILSLAEYFLGIYSQRLDLPVPLISDAAQRVLEHHT WPGNTRELENVIHFALLVSSGDEILPEHLNLPVGGTPLEQVQRIFNTASPAEQEALRSFLREQATT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 8e-29 | 42 |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 8e-29 | 42 |
| hrpS | ABQ88367.1 | HrpS | Virulence | Hrp PAI | Protein | 1e-33 | 41 |
| hrpS | AAA17650.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 1e-33 | 41 |
| hrpS | AAC35800.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 1e-30 | 41 |
