Gene Information

Name : PFLU1963 (PFLU1963)
Accession : YP_002871591.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2137581 - 2138129 bp
Length : 549 bp
Strand : -
Note : -

DNA sequence :
ATGGCAACGCCTCGATTGAGTGGTATTGCGCTCCTGCTGACGATGCTTGCCGTCCAGGCGGATGAACTCCCGCCGCCTGC
CTACCAATTGGCGGCGCATGACGCCGACATCCCTTCTACGGTGCTGTTTGCGATTGCCCTGCAGGAGAGTGGCATTCGCG
TCCGAGGTCGGCTGCTGCCCTGGCCGTGGACGCTGAATATTGCCGGTACCCCTTACCGCTTCGCCACTCGCCAAGCCGCC
TGTCACGCCTTGCTTCAGGCGCTAGCCCGACAAAACGCCAAGCGGGTCGATGCCGGACTCGGGCAAACCAACCTGGGTTA
TCACGGGCAACGTTTTTCCAGCCCTTGTGAAGCCCTCGACCCCTACCGAAATCTCGCGGTGACCGCCGCGCTGTTGCAGG
AGCATCACGCCGCCACCGGTGATTGGGTATTGGCTGCCGGGCGCTATCACCGCCCAGCGGGAGGTATACCTGCCGCGCGT
TACCGCGCCGAATTTACCCGGCAATTCGAACGGTTGCTGGTTTCCTTCAAACAGGGCACACCACCATGA

Protein sequence :
MATPRLSGIALLLTMLAVQADELPPPAYQLAAHDADIPSTVLFAIALQESGIRVRGRLLPWPWTLNIAGTPYRFATRQAA
CHALLQALARQNAKRVDAGLGQTNLGYHGQRFSSPCEALDPYRNLAVTAALLQEHHAATGDWVLAAGRYHRPAGGIPAAR
YRAEFTRQFERLLVSFKQGTPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-45 66
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 7e-44 63
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 2e-45 62
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 5e-32 52
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-32 51
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-33 48
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 8e-23 44
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 1e-20 44
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 9e-21 44
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 5e-19 43
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 4e-20 43
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 4e-20 43