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Name : gabD2 (PFLU1938) Accession : YP_002871570.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2111744 - 2113240 bp Length : 1497 bp Strand : - Note : - DNA sequence : GTGACAACCTTACAAAACCTACCCCTGCGTGACCCCAGCCTGTTGCGCGAATCAATGCTGATAGACGGCGCCTGGGTCCA GGCCGACAGTGGCAAAACCCTGGAGGTGCGTAACCCGGCCAACGGCCAACTGCTGGCCCTCGTCCCCGACGCCGGGGCGG CCGAGACCGAGCGCGCCATTGCCGCCGCCGAACGTGCCCAGCGCCGCTGGCGCGAGGAGTTGCCCGCCGAGCGGGCAAGG ATCCTGCTGCGGCTTCATCATCTGCTGCTGGACAACATTGACGACCTGGCGCTGATCCTGACCTCCGAGCAGGGCAAGCC GCTGACCGAAGCCTACGGCGAGTTGAAGTATGCCGCCGGCTTCATCGAATGGTTCGCTGAAGAGGCGAAGCGTGCATACG GTGACCTGATTCCGCCGAACGTCCCGGGGCGGCTCATCCTGGTGCAGAAGGTGCCCATCGGTGTGTTCGCTGCCATCACG CCGTGGAATTTCCCAGCGGCGATGATCACCCGCAAGGCGGCACCAGGCTGGGCCGCCGGCTGCGCCGGCGTGATCAAGCC GGCCCGTCAAACGCCGCTGTCGGCGCTTGCGCTGGGGGTGCTGGCCGAGCGCGCAGGATTGCCGGCGGGGCTCTGCAACA TCGTCACCGGCGCTGCCCAGCCAATTGGCCAGGCCTTGACTGACAGCCCGGTGGTACGCAAGCTGTCCTTCACCGGCTCA ACCGAGATCGGCGCTCGCCTGTTGGCCCAGTGCGCTCCCACCATCAAGAAGACCAGCATGGAACTGGGCGGCAATGCGCC TTTCATCGTCTTCGACGATGCCGACCTTGAAGCTGCGGTGAGCGGCGCCATGGCAGCCAAGTACCGCAATACCGGGCAAG CCTGCATTGCCGCCAACCGCTTCCTCGTTCAAGCTGGAATCTACGAAACCTTCGCCGCCCGCCTGGCCGAGCGCTCGGCT GCCTTGGTGGTGGGCCACGGCGTCGAGCCCGGAGTCGCCCAGGGGCCGTTGATCGACGACCAGGCGGTTGCCAAGGTCGA AGAGCACATCGCCGATGCCTGTGCGAGAGGCGCCCGTATACTCACGGGCGGGCAACGCCATGCACTGGGCGGCAACTTCT TCGAGCCGACGGTGCTGGCTGACGTCCCTCTGGAGGCCAAGATCTTCGCCGAGGAAACATTCGGCCCGGTAGCGCCGCTG TTCCGCTTCGAAGACGAAGCCGAGGCCATTGCCCTGGCCAATCACACGCCGTTCGGCCTCGCGGCCTATGTCTATACCCG CGACCTCGGGCGGGCGTTCCGGGTAGTGGAAGCGCTGGAAACGGGCATGGTCGGCGTCAACGAAGGGCTGATCTCCACCG AAGTCGCGCCTTTTGGCGGCGTCAAGACATCGGGGCTTGGCCGCGAGGGCTCGCGCTACGGGCTGGATGAGTACCTGGAG CTCAAGTACGTGGCGCTAGGGGGCCTGAGTGCCCCGGAAGTTTCGCAAAAGTCATAG Protein sequence : MTTLQNLPLRDPSLLRESMLIDGAWVQADSGKTLEVRNPANGQLLALVPDAGAAETERAIAAAERAQRRWREELPAERAR ILLRLHHLLLDNIDDLALILTSEQGKPLTEAYGELKYAAGFIEWFAEEAKRAYGDLIPPNVPGRLILVQKVPIGVFAAIT PWNFPAAMITRKAAPGWAAGCAGVIKPARQTPLSALALGVLAERAGLPAGLCNIVTGAAQPIGQALTDSPVVRKLSFTGS TEIGARLLAQCAPTIKKTSMELGGNAPFIVFDDADLEAAVSGAMAAKYRNTGQACIAANRFLVQAGIYETFAARLAERSA ALVVGHGVEPGVAQGPLIDDQAVAKVEEHIADACARGARILTGGQRHALGGNFFEPTVLADVPLEAKIFAEETFGPVAPL FRFEDEAEAIALANHTPFGLAAYVYTRDLGRAFRVVEALETGMVGVNEGLISTEVAPFGGVKTSGLGREGSRYGLDEYLE LKYVALGGLSAPEVSQKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-124 | 63 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-68 | 42 |
