Gene Information

Name : PFLU1930 (PFLU1930)
Accession : YP_002871563.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2106636 - 2107448 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence :
ATGACGCGGATGTCTACTCTGGGGCTCACCATCGCACTGATGCTATGGGGAGCTGCAGCGCAGGCCGTCGAGTTGATGCG
TTGGGAACGCCTCCCCCTCGCGGTCCCGCTGGTGATCAATCAGGAGCGGGTGGTCTTTGTCGATGAGGATGTTCGAGTCG
GCGTGCCCTCAACCCTGACGGACAAGCTGCGCGTGCAGTCCACCGGCGGCACGCTGTACCTGCGCGCGTCGGAAGCCATT
GCCCCGACTCGCCTGCAACTGCAATCGGTCGCGACGGGCGAGATTATCCTGCTGGATATCGCGGCCACTCCTGGTGATCA
ACCACTGGAGCCCGTGCGTATTCTCAAGAATGTTCCGGTGCAAGCTACCGAGACTGAATCGAGTACCGTACCTGTTCCAG
AACGTACACCGATCCCGGTCGCTTTGACGCGCTATGCCGCACAGAGCCTGTACGCGCCGCTGCGCACCGTAGAATCCCTA
CCCGGCGTACGCCGCGTACCGCTCAAGCTGCGCACCGAACTGCCGACCCTGTTGCCGACCGAAAACGTTTCCAGCACACC
TATCGCCGCCTGGCGACTCGGTGATTATTGGGTGACGGCAGTGAAGTTGCGCAATCGTGGTTCAGGGACTGTGCAACTCG
ATCCGCGTCAGATTCAGGCCACCCTGTTCGCCGCGGCCTTCCAGCATGCGTTCCTCGGGCCTGTCGGCAGCGCTGAAGAC
ACCACGCTCGCCTACCTCGTCACTCGCGGTGCCGGCCTCGAGAAAGCCGTGCTGCTGCCGCCCGTTGCGCGAGGGGCTGA
CGATGAAAGCTAA

Protein sequence :
MTRMSTLGLTIALMLWGAAAQAVELMRWERLPLAVPLVINQERVVFVDEDVRVGVPSTLTDKLRVQSTGGTLYLRASEAI
APTRLQLQSVATGEIILLDIAATPGDQPLEPVRILKNVPVQATETESSTVPVPERTPIPVALTRYAAQSLYAPLRTVESL
PGVRRVPLKLRTELPTLLPTENVSSTPIAAWRLGDYWVTAVKLRNRGSGTVQLDPRQIQATLFAAAFQHAFLGPVGSAED
TTLAYLVTRGAGLEKAVLLPPVARGADDES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-47 55
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 7e-47 54
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-47 54
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-46 54
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-47 53
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 7e-48 53
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 1e-40 51
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 3e-47 50
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 3e-47 50
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 5e-41 50
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 5e-41 50
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 9e-42 50
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-43 45