Gene Information

Name : PFLU1929 (PFLU1929)
Accession : YP_002871562.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2105129 - 2106646 bp
Length : 1518 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGCTAACGCCCTGCTCAAATGGCTGGTACCGGCTGCGCTGCTGGCCGTGGTGCTGATCATCCTGAAAACCTGGGT
CCCGGGTGGCAGCACGCCTTCTCCAGAGCACCCAGTTGATCAGGGCAATCTTCAATTATCCGCCGAGCAAGCCAAGTCGC
TCGGCATTGCTGGCGATACCCCACGCGATACGGTCGCCACCTTGGTCGGCCAAGTGAAGGCCATGCGCAGCGACATGCTC
GGTTTGAAGAAGCACAACGATTCGTTGTTGACGGAAAACAACCGCCTGCGCGAGCGGGAAAACAGTGTCGATTCGCGTAT
CCAGACGGCGCTTGGCAGCGTGACCCAGCAGGTCGACGAAGGTCGCCGACAAGCCAACGAGGCCCGGCTCAAAGCGGAAC
AAGACAGTCGTCAGGCTCGCGGTCTGCTGACGCAATTGCAGGGCCAGTTGTCGGGGCTGACCGGCAAAGGCAAGGATATG
CCAATAGGATTGGGGCTTGAGCCGGGCGACGGGGCTCAGTTCGACGGGCAGCATTCTGCCAATGATGCGCTGCAGTGGAT
TGAGCCCTCGGATGCTCCGCCCACCAACGCCCGAGGCAAAACCAAGATCTCTTCCGCACTGAGTCTGCCTACCGCCTTCA
ACTCACTGGAAGGCTTGAACGATAACGCGAATGATCGCAGCCAGAAGCCGCTAGGTGCGGTCACCAACAATAAGCGCGAC
CTGGCGCAATCCGTCGATCGTGCCGAAGGCGCGAGACCGGTCTACACCATTCCCGAAAACGCGACATTGATGGGCTCGGT
CGCCATGACTGCGCTGATCGGCCGAGTCCCGGTGGACGGCACCGTGAATGATCCCTATCCCTTCAAGGTACTGGTTGGTC
CGGAGAACCTGACTGCCAACGGCATCGACCTGCCAGACGTCGCGGGTGCCGTGATGAGCGGCACAGCGTCCGGTGACTGG
ACGCTGTCCTGCGTACGCGGACAGGTCGAGTCAATTACCTTTGTGTTTACCGATGGCACCATCCGCACGGTGCCTCAGCC
GAAGGCGGTAGCCAGCCGCACTGCCTCCACCACCCAGAGCTCGAACACCGACAAGATCCGTGGCGGGCTCGGTTACCTGT
CCGATCCGTATGGCATTCCTTGCATCGCTGGCGGGCGCCGCTCGAACGCCCAGCAATACCTCGGCAGCCAGAGCCTGATC
ACTGCCGCCGGTGCCGGTGTCGCCGCCCTGCTCGGGAATGAGCGGAACAACAGCAGCGTGATCAACGCAGGCGGCACTAC
GCTCGGGGTCACCAGCAGCACGGGCAACAATGCACTGAGTTCGATCCTCAGTGGCGGGGTCAGTGATGTCCGCGAGTGGG
TGAACAAACTGTATGGCGAAGCCTTTGCTGCCGTGTACGTACCACCTGCAGCGCAGGTCGCACTGCACCTCGACCATGAG
ATCACCATCGACTACGAGCCCAAGGGCCGGAGCGTTCGCCATGAAAAAGACCATGCTTCTCTGCCTGACCTGGATTAG

Protein sequence :
MKANALLKWLVPAALLAVVLIILKTWVPGGSTPSPEHPVDQGNLQLSAEQAKSLGIAGDTPRDTVATLVGQVKAMRSDML
GLKKHNDSLLTENNRLRERENSVDSRIQTALGSVTQQVDEGRRQANEARLKAEQDSRQARGLLTQLQGQLSGLTGKGKDM
PIGLGLEPGDGAQFDGQHSANDALQWIEPSDAPPTNARGKTKISSALSLPTAFNSLEGLNDNANDRSQKPLGAVTNNKRD
LAQSVDRAEGARPVYTIPENATLMGSVAMTALIGRVPVDGTVNDPYPFKVLVGPENLTANGIDLPDVAGAVMSGTASGDW
TLSCVRGQVESITFVFTDGTIRTVPQPKAVASRTASTTQSSNTDKIRGGLGYLSDPYGIPCIAGGRRSNAQQYLGSQSLI
TAAGAGVAALLGNERNNSSVINAGGTTLGVTSSTGNNALSSILSGGVSDVREWVNKLYGEAFAAVYVPPAAQVALHLDHE
ITIDYEPKGRSVRHEKDHASLPDLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-86 49
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-84 49
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 9e-87 49
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-87 49
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-87 49
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 1e-87 49
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 6e-74 43
STY4570 NP_458655.1 putative exported protein Not tested SPI-7 Protein 1e-67 41
t4268 NP_807865.1 hypothetical protein Not tested SPI-7 Protein 2e-68 41