Gene Information

Name : PFLU1923 (PFLU1923)
Accession : YP_002871557.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2099709 - 2100665 bp
Length : 957 bp
Strand : -
Note : -

DNA sequence :
ATGCCTGTTGCCTGCTCGTCAATCCCGCCCACAAAGCTACGGCCGTTGGCGCTAAGCATCCTGCTAGCGTGCGGCCCAAG
CATGGCGCTGGACACCGCCAGCATCACCTCCTCCGTGCTTTCTCCAAACTGTCTCGAATACAGGGTCGTCGGCATCTGTT
TCTGGCTCCTCTGCACGCCCTTCGGCTGCAAGGTCAAAACCTCGACCAAGGTTCGTCATTTCATTCCTGAACTGGTGGTC
TCGAGCTACGCCACCACCGGCAACAATCCCTGGGCCGAGATGGCCACCCTCTCTCCCCCCATCAGCGGTGCGGAAGGTGG
TGGCAACCTGATCACGCCGAACACCCACCGCGCCAACCTGCCCCGCTTCAAGAACGTCGATGGCATTGGCCACCCCGGTG
GCTGGATCGCCACGCAACTGGCTTCGCAATCCGGCTACGCCTGCGCCAGCGGCGCGACTGCATTCATGCCCTACTACCTG
AGCACCCTGGACTCGCTGGCCTGGCGTCATGGCATTCCGGAAAATTTCTATCCCGAGTCGCTCATGCCGGGGATCCGTGA
AATTGGTCGTCAGGCTTCGGGAAACATGTGGGGTAACATCTATCCCCGCCAAGGCTTTCTGGTACAACCCGACGACTTCA
AGGCGGCCGCAGTCATGGCGCAACGGGCTGGCGATGTCATCACCCGCAACGGGCAACCGCATGTGTACTTACCACTCATG
CCCGCCAAGCACGACGGTTACTGGCCGCCTGGCCCGATCGTTGAGAACGACGCTTCGACCCACAAATGGCAATTGCTCTA
CCCCCAGGTTCAGCCGACGTGCGCCATCTTCCCCAGCGATCCGGTACAGAGCACGGATGGCGGCTACGCCTGGTCGCTGT
GGCGGCGCTATAGCTGTTGCAAACGTGAGGGGCAGACCTTTCTGTTCAGCATCGACTTCGAAGGAGATGCGTCATGA

Protein sequence :
MPVACSSIPPTKLRPLALSILLACGPSMALDTASITSSVLSPNCLEYRVVGICFWLLCTPFGCKVKTSTKVRHFIPELVV
SSYATTGNNPWAEMATLSPPISGAEGGGNLITPNTHRANLPRFKNVDGIGHPGGWIATQLASQSGYACASGATAFMPYYL
STLDSLAWRHGIPENFYPESLMPGIREIGRQASGNMWGNIYPRQGFLVQPDDFKAAAVMAQRAGDVITRNGQPHVYLPLM
PAKHDGYWPPGPIVENDASTHKWQLLYPQVQPTCAIFPSDPVQSTDGGYAWSLWRRYSCCKREGQTFLFSIDFEGDAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-91 60
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 6e-92 60
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 2e-83 59
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-83 59
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-82 58
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-86 57
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 4e-74 53
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 3e-74 52
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 1e-75 51
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 1e-78 50
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 1e-78 50
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 2e-69 50
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 1e-67 48
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 4e-61 47