|
Name : PFLU1922 (PFLU1922) Accession : YP_002871556.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2098330 - 2099712 bp Length : 1383 bp Strand : - Note : - DNA sequence : ATGAGTCGGCTTCTCGCGCGACCATGGCTTGCCGTGGAGGGCCTGCTGCTCTGTGGATTGTTCGCCATGGCCACTCATGC CCACGCTGCTGAAGGTGATTACCGCCTGGGCACCCAGGGCGAAGTACTCGACGACCGGGTGATGTACACCATTGGTGGCG GCTCGGCAGTCGGCTCACCGAGTTCGCTCTACCGACCCAGTGCTCTTGGTGTCGGTGGGTCATGGCGAGCGAACATGATG TGCGGAAACATGAGCCTCACCAACACCCTGCAAAACCAGTTGAACGGCGTCACCGAAGGTTTCCAGCAGATCATGGGCAG CATCGTGCAGAACGCGACCCAAGCCGTGATGTCGCTACCGGCGTTGATCATCCAGCGCGCCAACCCCGGCCTCTATGAGT TGCTCAGTAACGGGGTGATGCAAGGCCGTATCGACTTCGACCGCTCCAAGCTGACCTGCCAGGCCATGGCCGAGAAGATG GCGGACAAGGTCGGTCAAGCCGGCTGGGGCGCGCTGGCCAAGAACCAAGAAATGCAGGGCAATCTGGAGCAAACCGGCGG TGATGCGGTGGCTGCGGTAAAACATACCGAGACCCATAACGGCAACAATGGGGTGTCTTGGGTCGGCGGCTCAAAGGCTG GAGGTAGTGGGCAGACACCCATTCGAGTGACCTCCGACGTAGTGCGAGCAGGCTACAACCTGCTGCATAACCGGTCGGCG GATGACAGTGCCTCGATCAGTAGCAACGACTGCCTGGGTGGGGCCATTTGCCAGACTTGGACCTCGCCCCAGGAAGAGTC CGAATGGGCAGTTCGCGTGTTGGGCGAGACCGAAGTCGCAACCTGCGACAGCTGCGAAACCCTGCGTGCGACCGCTGGCA GCGGACTGACGCCGCTGATTCAGGAGGCCTACAGCGAACGCCTCAAGGCCCTGCAAGGGCTGCTGTCGGGCTCACTGCCG CCTACCCCTGACAACCTGGCTAAAGCCTCGAGCCCGATGCTGCCGGTGACCCGTGGCGTGATTGAAGCCCTGCGCGATGA CCCCGACCAGGATCTGCTGACACGACGCCTGGCCAGCGAGACGGCCCTATCCAGCGTACTCGACAAGGCACTGCTGCTAC TGCGTACGCTACTGGCGGGCAGTTACGAACCGAACATCGCCTCCGCCGAGCCGGCCCAGACCGCCTTGACGAAAAACATC GACACACTGGAGCGCGAAATACGCCTGCTGCAGACCGAACTGCAGGTCCGGCAGATGTTGGCCACCAACACCGCCAGCCT GGTGCTCGATCGGCATGCCGGTGGTGCCGATGCTTCGCGTGCCGTCGAGCAAGGCGACCCCGAGCCCGGTCGACTCAATG ACGCTGACGCCCGGCGTAAGTGA Protein sequence : MSRLLARPWLAVEGLLLCGLFAMATHAHAAEGDYRLGTQGEVLDDRVMYTIGGGSAVGSPSSLYRPSALGVGGSWRANMM CGNMSLTNTLQNQLNGVTEGFQQIMGSIVQNATQAVMSLPALIIQRANPGLYELLSNGVMQGRIDFDRSKLTCQAMAEKM ADKVGQAGWGALAKNQEMQGNLEQTGGDAVAAVKHTETHNGNNGVSWVGGSKAGGSGQTPIRVTSDVVRAGYNLLHNRSA DDSASISSNDCLGGAICQTWTSPQEESEWAVRVLGETEVATCDSCETLRATAGSGLTPLIQEAYSERLKALQGLLSGSLP PTPDNLAKASSPMLPVTRGVIEALRDDPDQDLLTRRLASETALSSVLDKALLLLRTLLAGSYEPNIASAEPAQTALTKNI DTLEREIRLLQTELQVRQMLATNTASLVLDRHAGGADASRAVEQGDPEPGRLNDADARRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG50 | AAN62272.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 2e-96 | 56 |
| ORF C42 | AAN62135.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 9e-90 | 56 |
| pph90 | CAI36131.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 4e-92 | 54 |
| unnamed | ABR13356.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 1e-89 | 53 |
| RL016 | AAP84143.1 | putative pathogenesis-related protein | Not tested | PAPI-1 | Protein | 2e-91 | 53 |
| EXA19 | ABD94628.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 1e-91 | 53 |
