Gene Information

Name : PFLU1917 (PFLU1917)
Accession : YP_002871551.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Unknown
Product : putative traC-like DNA primase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4227
EC number : -
Position : 2094201 - 2095253 bp
Length : 1053 bp
Strand : -
Note : similarity reduced to the N-terminal region of the Escherichia coli database match

DNA sequence :
ATGCAGGCCTGCATCAATCCAGCCCATCACCCACCGGGGAACCCTCCCCCGGCGGGCAAGGCGTTCCTCCATTTTTTTCT
CGAGGAAATTGCCATGCGCGATATCTACCAAGACGTAACTGACAAGATCGTTACCGCGTTAGACCAAGGCGTTGCTCCCT
GGATCAAACCCTGGTCCTCAAGTGGCTCCGCTTACATCGGCCATCAACCCTACCCCATCAATGCCATCACGCGACGTCCG
TATTCGGGCATCAATTTACCGCTGCTCTGGGCCGAGGCCAGGTTGCAGGGGTTCACTCAAGATCGTTGGCTGACCTTCAA
CCAAGCTAAAAAGGCCGGTGGGCACATCCGTAAGGGTGAGCACAGCACTCTGGCTGTGCTCTACAAGCCGATGGAGCGCG
AGGAACAGACTGAGTCAGGCCAACCCGTACTCGATGAAAACGGTCAGCCCAAGGTCGCTCACTTTGGCATTCTCAGGACG
CATTTTTTGTTCAACATCGAGCAAACGGAAGGGCTCGAAACGTTCAACGAAACCTTGCTCGAAGCGGGCCCGACCGCCCC
CTTCCTAGCCAACAGTGCTGCAGAAAATCTGCTCTTAAGTACTGGCGCAAACATCGTTCATCGATCTGCCGACGAAGCCT
TTTACCACCCGATCAGGGATCTCATCCAACTGCCGACAAAAGCGCAATTCCACGATGAAGGTGGGTACTACGCCACCGCA
CTTCACGAGCTGACGCACTGGACCGGGCATCACGCTCGGTTGCAGCGCGAAGGCGTGACGTCATCCTGTCCGTTCGGCTC
GCCAGGCTACGCGTTTGAGGAGTTGATCGCCGAGATGGGCGCTGCGTTTTTATGTGCTTACGCCGGCATTCAGGGAGAGC
TGAGGCACGAGGGCTATATCGATTCCTGGCTCAGCCTGCTCAAGGCTGACAAGCGCGCGATCTTTCGTGCCAGTGGCCAG
GCCCGAAGCGCCTCGGAGTATGTACTCAACCTGGAGCAGCAACTGAAGCAAGCGGTCTTGGATGACTCGCTGTGCATGAA
CGATGGAGCTTGA

Protein sequence :
MQACINPAHHPPGNPPPAGKAFLHFFLEEIAMRDIYQDVTDKIVTALDQGVAPWIKPWSSSGSAYIGHQPYPINAITRRP
YSGINLPLLWAEARLQGFTQDRWLTFNQAKKAGGHIRKGEHSTLAVLYKPMEREEQTESGQPVLDENGQPKVAHFGILRT
HFLFNIEQTEGLETFNETLLEAGPTAPFLANSAAENLLLSTGANIVHRSADEAFYHPIRDLIQLPTKAQFHDEGGYYATA
LHELTHWTGHHARLQREGVTSSCPFGSPGYAFEELIAEMGAAFLCAYAGIQGELRHEGYIDSWLSLLKADKRAIFRASGQ
ARSASEYVLNLEQQLKQAVLDDSLCMNDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api91 CAF28565.1 hypothetical protein Not tested YAPI Protein 5e-61 47
YpsIP31758_3690 YP_001402644.1 antirestriction protein Not tested YAPI Protein 7e-61 47
YE3460 YP_001007622.1 hypothetical protein Not tested YAPI Protein 1e-61 47
PMI2554 YP_002152273.1 DNA primase Not tested Not named Protein 9e-61 44
unnamed AAP70295.1 antirestriction protein Not tested HPI Protein 2e-49 44
Pmu_02920 YP_005176191.1 hypothetical protein Not tested ICEPmu1 Protein 5e-55 41