Gene Information

Name : PFLU1911 (PFLU1911)
Accession : YP_002871545.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 2082870 - 2084417 bp
Length : 1548 bp
Strand : +
Note : -

DNA sequence :
ATGACTTCATCGCCCAATCTCGACCAAATGTCCCCTGACCAACTGCGCGCCCTCGCGGCGCAGTTGCTGTCCCAGATTGA
TTCTCTCGGGCAGCAGGTCGACCGGATGGGCAAGAAGAACGACCGCGACCAAACCATCATCGAGCAGCTCACCCACGAAA
TCGCCTGGTTCAAACGTAACAAGTTTGCCAAGCGCAGTGAGCAATTGAGCCCTGCCCAAGGCAGCCTGCTCGACGACCTG
CTCGACACCGACATCGTGGCCATCGAAGCCGAGCTGAAGGCGTTGAATCCGCCGGCTGCGCCGGCCGAACCACGCCAGCA
GCCCAAGCGTGTTTCCTTGCCTGCGCAGTTTCCGCGTACCGTGATTTATCACGAGCCCGACACCACCCTGTGCACTTGCG
GCTGCCAACTCCAGCGCATCGGCGAGGACGTCAGCGAGAAGCTCGATTACACGCCGGGCGTGTTCACCGTTGAACAGCAT
GTGCGTGGGAAGTGGGCCTGCCGTCAGTGCGAAACACTGATCCAGGCACCGGTACCGGCCCAAGTGATCGACAAGGGCAT
CCCAACTGCGGGCCTGATCGCGCATGTGTTGGTGGCGAAGTTCGCTGACCACTTGCCGCTGTATCGGCAGGAGAAAATCT
TCGGGCGCGCTGGTTTAGCGATCCCACGCTCCACACTAGCTCAATGGGTTGGACAAACAGGTGTACAGCTTCAGCCATTA
GTTGATGCCTTGCGAGAAGCCGTCCTGGCGCAGCAAGTTGTCCACGCCGATGAGACGCCGGTGCAGATGCTTGCGCCCGG
AGAGAAGAAAACTCACCGCGCTTATGTCTGGGCTTACTGCACCACGCCGTTTTCGGCGCTTAAGGCAGTGGTTTATGACT
TCAGCCCGAGCCGCGCCGGTGAGCATGCGCGTAACTTCCTCGGCGCGTGGAATGGCAAGCTGGTGTGCGACGACTTTGCT
GGTTACAAAGCTGGGTTTGAGAAAGACATGATCGAAATCGGCTGCATGGCTCACGCCCGCCGCAAGTTTTTCGATCTGCA
TGTCGCGAATAAAAGTCAGTTGGCAGAACAGGCGCTGCACTCGATTGGCGGTTTGTACGAAGTTGAGCGGCAAGTGCGAG
ACATGAGTGACGAAGATCGCTGTCGAATACGGCAAGAAAAAGCAGCGCCGCTGGCCAAAGCACTGCACGACTGGATGTTG
GCCCAGCGCGATCTTGTGCCCAATGGATCAGCAACGGCCAAAGCCTTGGATTACAGCCTTAAACGCTGGGTAGCGCTGAC
GCGCTACCTGGTCGATGGGGCGGTGCCCATAGACAACAATCCAGTCGAAAACCAGATCAGGCCGTGGGCACTTGGACGCT
CGAACTGGTTGTTTGCTGGATCGCTTCGCAGCGGCAAACGGGCAGCGGCGATTATGAGTTTGATCCAGTCGGCACGTATG
AATGGGCACGATCCGTATGCCTATCTCAAAGATGTGCTGACGCGGCTGCCGACGCAGCGGGCGAGTGAGATCGACCAACT
GCTGCCGCATCAGTGGGTATCTGCCTGA

Protein sequence :
MTSSPNLDQMSPDQLRALAAQLLSQIDSLGQQVDRMGKKNDRDQTIIEQLTHEIAWFKRNKFAKRSEQLSPAQGSLLDDL
LDTDIVAIEAELKALNPPAAPAEPRQQPKRVSLPAQFPRTVIYHEPDTTLCTCGCQLQRIGEDVSEKLDYTPGVFTVEQH
VRGKWACRQCETLIQAPVPAQVIDKGIPTAGLIAHVLVAKFADHLPLYRQEKIFGRAGLAIPRSTLAQWVGQTGVQLQPL
VDALREAVLAQQVVHADETPVQMLAPGEKKTHRAYVWAYCTTPFSALKAVVYDFSPSRAGEHARNFLGAWNGKLVCDDFA
GYKAGFEKDMIEIGCMAHARRKFFDLHVANKSQLAEQALHSIGGLYEVERQVRDMSDEDRCRIRQEKAAPLAKALHDWML
AQRDLVPNGSATAKALDYSLKRWVALTRYLVDGAVPIDNNPVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARM
NGHDPYAYLKDVLTRLPTQRASEIDQLLPHQWVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 0.0 85
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 3e-138 54
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-63 42
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 7e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU1911 YP_002871545.1 putative transposase VFG1700 Protein 9e-64 42