Gene Information

Name : PFLU1888 (PFLU1888)
Accession : YP_002871523.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Unknown
Product : putative transposase subunit B
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2063428 - 2064177 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTCAATCCTCGATACTGCCCAAAACCTTATGTCTCTTGGTCTGCACGGGATGGCAGCAGCCTACGAGCGTCAGCT
TGAAACACCGGCGCTGCTGAAAGAACCATTCGAAACAAGGCTTGGTTTAATGATGGATGCCGAAAATAGCGAGCGTGAGA
GCAGAAAGGTTGGACGTTTGCTAAAGAACGCAAGGCTTCGTGAGAATGAAGCCACAATAGACAGCATTGAATTCAAGGCG
TCTCGAGGCATAGACCGCAATACGGTCATGTCCCTTGGTGAGTGCGAGTGGTTAGCGCGACGTCAGAATGTGATCATCAC
GGGCGCTACGGGCACTGGCAAAACCTGGCTCGCTTGCGCACTCGGAAACCAAGCCTGCCGCCTTGGGCGAGCGACGCTGT
ATCGCACTGCCACGAAGCTTTTTGAAGAAATCTCACTTTCTTACGCTGACCACACCACGCCTAAACTACGTCGGCATTTG
ATCCGCGCAGAATTATTAGTCATAGATGATTTGGGCATCGGTGGCATTGACGCCCAGTTGGGCCCGTTCCTCCTGGACGT
TATCGACGAGCAGTCACAGAACGGCTCATTGTTGATTACAAGTCAGTACCCTAAAGAAAAATGGTATGACCTGTTCTCCG
ACCCCACGATTGCCGATGCAATTCTTGACCGTATCGTTCACAAGTCCCACGTTATAGAACTGAAAGGCGAATCAATGCGA
AGGATCAAAAGTCGCAAACGGTTGCAATAG

Protein sequence :
MKSILDTAQNLMSLGLHGMAAAYERQLETPALLKEPFETRLGLMMDAENSERESRKVGRLLKNARLRENEATIDSIEFKA
SRGIDRNTVMSLGECEWLARRQNVIITGATGTGKTWLACALGNQACRLGRATLYRTATKLFEEISLSYADHTTPKLRRHL
IRAELLVIDDLGIGGIDAQLGPFLLDVIDEQSQNGSLLITSQYPKEKWYDLFSDPTIADAILDRIVHKSHVIELKGESMR
RIKSRKRLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 5e-36 44
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 4e-36 44
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 4e-36 44