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Name : PFLU1668 (PFLU1668) Accession : YP_002871307.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Virulence Product : putative polysaccharide biosynthesis-related membrane protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1831310 - 1833304 bp Length : 1995 bp Strand : + Note : - DNA sequence : ATGGAAAAATTGAGAGGACTGCTTCTGGGCCTCCCCAGGCGTACAAAACGGCTGATCCAGGTAGCTACTGACGTCTTTGT GGTGTGGGTAGCGTTGTGGCTGGCCTTTGCCGTCAGATTGGGCCTGGATGAAATGATTAATCCTTTGATTTTTCATTTTT GGCTGTTTTTAGCGGCACCGGTTGTGGCCATCCCTCTGTTTATCCGATTTGGAATGTACCGAGCTGTTATGCGCTATTTT GGCAATGACGCGTTGATTGCCATCATCAAGGCTGTCAGCTTGTCTTCACTGGTACTGGGCTTTTTTGTCTACTGGTACAG TAATCATGAGCACGTAGTGCCACGTTCCATCATCTTTAACTATTGGTGGCTGAGCATGATCATGGTTGGCGGGCTCAGGT TAGCCATGCGGCAGTACTTTTTAGGAGATTGGTTTTCAGCGTCCCAGCACGTCCCTTTCACCAATCGCGACGATGGCTTG CCACGTGTAGCCATCTACGGTGCTGGTTCCGCTGGTAATCAATTGGTTGCGGCTCTTCGCATGGGCCGTGTGATGCGGCC AGTTGCGTTCATCGATGACGATTCGAGCATCACTGACCGGGTGATTTCTGGATTGCAGGTTTACAAACCCAAGCATATCC AATTGATGATCGAGGCAACCGGCGCTCAGGAAATACTATTAGCGATCCCATCTTCGAATCGCGGTCGTCGCCGTGAAATT CTGAGTTTCCTTGAGGGATTCCCTCTTCATGTGCGCAGCGTGCCGGGCTTTATGGATTTGGCAAGCGGCCGAGTCAAGGT TGATGATATTCAAGAGGTTGATATTGCAGACCTACTTGGCCGTGATGCCGTTCCCGCCCAAGGCGAATTGCTAGAGCATT GTATTAGAGGGCAAAGTGTACTGGTTACAGGAGCTGGTGGTTCAATTGGTTCTGAGCTTTGCCGACAGATCCTTGTGCTT CGCCCCACGATATTAATTCTGTACGATCACAGTGAGTTCAATCTCTACAGCATTCTTTCCGAGCTTGAGCAGCGAATTAC CCGTGAATCGCTACCCGTCAAGCTCCTGCCTATTCTCGGTTCCGTACGTAATCCTAGTAAACTTTTGGACGTGATGAAGA CTTGGCGAGTACATACGGTTTATCATGCCGCCGCCTACAAACATGTACCTATGGTTGAACATAATATCGCTGAAGGTGTT TTGAATAATGTCGTCGGTACGCTCAATACCGCTCAAGCTGCGCTTCAGTCGGGAGTTGCTAACTTTGTCCTAATCTCAAC AGATAAGGCTGTGCGCCCAACAAATGTCATGGGCAGTACCAAAAGGCTTGCCGAGTTGACGTTACAAGCGCTTAGTAATG AACTTGCCCCAGTGCTGTTCGGCGACAAGTCGAACATATCAAGGGTTAATAAAACACGTTTCACCATGGTTCGCTTCGGT AATGTGTTAGGCTCCTCTGGCTCGGTAATTCCGTTGTTTCACAAGCAGATCAAGTCCGGGGGGCCTTTAACCGTTACCCA CCCCAAAATCACCCGCTACTTCATGACCATCCCCGAAGCCGCGCAATTGGTCATCCAAGCCGGATCAATGGGGCAGGGCG GTGACGTGTTCGTACTCGACATGGGCGAACCCGTAAAAATCGTTGAGCTCGCTGAGAAGATGATTCACCTTTCTGGCCTG AGCGTGCGCTCCGACAAGAATCCCCACGGCGATATCGCCATCGAATTCACCGGCCTACGCCCGGGTGAAAAGCTTTACGA AGAGTTACTAATCGGGGACAACGTAGTCGCGACCCAGCATCCCATGATCATGAGTGCTAATGAAGACCATCTTTCCTGGG AGGTCCTCAAGGGAAAATTGACCGAGCTATTGGCGGCAGTGGATGAGGACGACTACACCCGAGTCCGCCAACTACTGCGC GACACCGTCAGCGGCTACTCCCCCGACGGCGAAATCGTTGACTGGATCTACCAACAACGCCGACTTGAGCCGTGA Protein sequence : MEKLRGLLLGLPRRTKRLIQVATDVFVVWVALWLAFAVRLGLDEMINPLIFHFWLFLAAPVVAIPLFIRFGMYRAVMRYF GNDALIAIIKAVSLSSLVLGFFVYWYSNHEHVVPRSIIFNYWWLSMIMVGGLRLAMRQYFLGDWFSASQHVPFTNRDDGL PRVAIYGAGSAGNQLVAALRMGRVMRPVAFIDDDSSITDRVISGLQVYKPKHIQLMIEATGAQEILLAIPSSNRGRRREI LSFLEGFPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDAVPAQGELLEHCIRGQSVLVTGAGGSIGSELCRQILVL RPTILILYDHSEFNLYSILSELEQRITRESLPVKLLPILGSVRNPSKLLDVMKTWRVHTVYHAAAYKHVPMVEHNIAEGV LNNVVGTLNTAQAALQSGVANFVLISTDKAVRPTNVMGSTKRLAELTLQALSNELAPVLFGDKSNISRVNKTRFTMVRFG NVLGSSGSVIPLFHKQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGEPVKIVELAEKMIHLSGL SVRSDKNPHGDIAIEFTGLRPGEKLYEELLIGDNVVATQHPMIMSANEDHLSWEVLKGKLTELLAAVDEDDYTRVRQLLR DTVSGYSPDGEIVDWIYQQRRLEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-79 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PFLU1668 | YP_002871307.1 | putative polysaccharide biosynthesis-related membrane protein | VFG0029 | Protein | 4e-119 | 47 |
| PFLU1668 | YP_002871307.1 | putative polysaccharide biosynthesis-related membrane protein | VFG1300 | Protein | 2e-77 | 43 |
