Gene Information

Name : PFLU1588 (PFLU1588)
Accession : YP_002871229.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Unknown
Product : putative phage capsid-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1739762 - 1740658 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence :
ATGCGTAACGATACCCGCGTCCTGTACAACGCCTACCTGCAACAACTCGCGCAACTGCACGGCGTGAGCGACGTCACCAC
CAAATTCACCGCCGCCCCAAGCGTCGCCCAAACACTGGAAACCCGGATTCAGGAATCCAGCGCATTTCTCAGCGCCATCA
ACGTGTTCGGCGTTTCGGAGCAGTCGGGCGAAAAAATCGGCATCGGTATCGACGGCACTATTGCCAGCACCACCGACACC
ACGCTCAAAGATCGAGAGCCCCGCGACCCAAGCGGACTGGATAACCGTGGGTACACCTGCACCCAAACCAACTTCGACAC
CGGCATCCGCTACCAGAAGCTGGACCAGTGGGCCAAGTTCAAGGACTTCCAGGCGCGAATTCGCGACGCGATCATCAAGG
CACAGGCGCTCAACCGCATCATGATCGGCTGGAACGGCACCAGTCGGGCAGCAACCTCCAACTCAGCAACCAACCCACTG
CTGCAGGACGTGAACGTCGGGTGGTTGCAGAAAATGCGCTTGGAAAATGCTGCTCGCGTGTTGCATGAAGTAGTCGACGG
CAGCGGGAAGATCCAGATCGGCGCCGGTAAGGACTTCGAAAACATCGACGCCCTGGTCATCAGCATGGTCAACGAGTTCA
TCGAACCTTGGTACCAAGAAGACACCGACCTGGTGGTGATCTGCGGTCGCCAGCTGCTTGCTGACAAGTACTTCCCGATC
ATCAATAGAACCCAGGCGCCGACCGAGATGCTTGCGGCCGATATCGTCACCAGCCAGAAGCGTATCGGCAACCTGCCAGC
CGTGCGCGTGCCGCACTTCCCGGCCAACGGCCTGCTGGTTACCCGCCTCGACAATCTGTCGCTGTACTGGCAGGAATGTG
CAACACAGCCTCACTGA

Protein sequence :
MRNDTRVLYNAYLQQLAQLHGVSDVTTKFTAAPSVAQTLETRIQESSAFLSAINVFGVSEQSGEKIGIGIDGTIASTTDT
TLKDREPRDPSGLDNRGYTCTQTNFDTGIRYQKLDQWAKFKDFQARIRDAIIKAQALNRIMIGWNGTSRAATSNSATNPL
LQDVNVGWLQKMRLENAARVLHEVVDGSGKIQIGAGKDFENIDALVISMVNEFIEPWYQEDTDLVVICGRQLLADKYFPI
INRTQAPTEMLAADIVTSQKRIGNLPAVRVPHFPANGLLVTRLDNLSLYWQECATQPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 3e-71 58
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 8e-76 56
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 8e-76 56