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Name : clpB1 (PFLU0782) Accession : YP_002870447.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 882480 - 885044 bp Length : 2565 bp Strand : + Note : - DNA sequence : ATGCGTATTGATCGTTTAACCAGCAAATTGCAGTTGGCACTGTCTGACTCTCAATCCTTGGCGGTGGGCCTCGACCACCC GGCCATTGAGCCTGCGCACTTGATGCAGGCGCTTCTGGAGCAGCAAGGTGGTTCTATCAAACCCTTGCTGATGCAGGTGG GCTTTGACGTCAACAGCCTGCGCAAGGAGTTGAGCAAAGAGCTCGACCAACTGCCGAAAATCCAAAATCCTACTGGCGAC GTGAATATGTCGCAGGATCTGGCGCGCCTGCTTAACCAGGCAGACCGCCTGGCCCAGCAGAAAGGTGACCAGTTCATTTC CAGTGAACTGGTGCTGCTCGCCGCCATGGACGAGAACAGCAAGCTCGGCAAGTTGTTGCTGGGTCAGGGCGTGAGCAAGA AAGCCCTGGAAAACGCCATCAACAACCTGCGTGGCGGCGATGCGGTGAACGACCCCAACCACGAGGAGTCGCGCCAGGCC CTGGATAAATACACCGTTGACCTGACCAAGCGCGCCGAAGAGGGCAAGCTTGACCCGGTGATCGGCCGTGACGATGAAAT CCGTCGCACCATCCAAGTGCTGCAACGTCGTACCAAGAACAACCCGGTATTGATCGGTGAGCCTGGCGTGGGTAAAACCG CGATTGCCGAAGGTCTGGCCCAGCGCATCATCAACGGTGAAGTGCCGGACGGCCTCAAAGGCAAGCGCCTGCTGTCCCTG GACATGGGGTCGTTGATCGCCGGTGCCAAGTTCCGTGGCGAGTTCGAAGAACGCCTGAAATCCCTGCTCAATGAGCTGTC GAAGCAGGAAGGGCAGATCATTCTGTTTATCGACGAACTGCACACCATGGTCGGTGCCGGTAAAGGCGAAGGCTCGATGG ACGCCGGCAACATGCTCAAACCCGCTTTGGCGCGCGGTGAGTTGCACTGCGTCGGTGCGACCACGCTCAACGAATACCGC CAGTACATTGAAAAGGACGCGGCCCTTGAGCGTCGCTTCCAGAAAGTGCTTGTGGAAGAGCCGAGCGAAGAAGACACCAT TGCCATCCTGCGTGGCCTGAAAGAGCGTTATGAGGTCCACCACAAGGTGGCGATCACCGATGGCGCGATCATTGCGGCGG CCAAATTGAGCCATCGCTATATCACTGACCGTCAGTTGCCAGACAAGGCCATCGACTTGATCGACGAAGCGGCCAGCCGT ATCCGCATGGAAATCGACTCCAAGCCGGAAGTGCTCGACCGTCTGGACCGGCGCCTGATTCAACTTAAAGTTGAGTCCCA GGCCCTGAAGAAAGAAGAAGACGACGCGGCGAAGAAACGCCTGGAAAAACTCCAGGAAGAAATCGTCCGCCTGGAACGTG AGTATTCGGACCTGGAAGAAATCTGGACCTCGGAAAAAGCCGAAGTACAGGGCTCTGCCCAGATCCAGCAAAAGATCGAG CAGTCGCGGCAGGAACTCGAAGCTGCCCGCCGTAAAGGCGACCTGAACCGCATGGCCGAATTGCAGTACGGGGTGATCCC GGACCTGGAGCGCAGCCTGCAGATGGTCGACCAGCACGGCAAAAGCGAGAACCAATTGCTGCGCAGCAAGGTGACCGAGG AAGAAATTGCCGAAGTCGTCTCCAAGTGGACCGGTATCCCGGTGTCGAAGATGCTCGAAGGCGAGCGCGACAAGCTGCTG AAAATGGAAAGCCTGTTGCACCAGCGTGTCATCGGTCAGGAAGAGGCCGTGGTGGCGGTGTCCAATGCGGTGCGGCGCTC CCGGGCCGGCTTGTCCGACCCGAATCGTCCGAGCGGCTCGTTCATGTTCCTCGGCCCGACCGGTGTGGGTAAGACCGAGC TGTGCAAGGCCTTGGCCGAGTTCCTCTTTGATACTGAAGAGGCCATGGTGCGAATCGACATGTCTGAGTTCATGGAGAAG CACTCGGTGGCTCGCCTGATTGGCGCTCCACCAGGCTATGTGGGCTACGAGGAGGGCGGTTACCTGACCGAAGCCGTGCG GCGTAAGCCTTACTCGGTGATCCTGCTGGATGAGGTCGAGAAGGCGCACCCGGATGTGTTCAACATCCTCTTGCAAGTGC TGGAGGATGGCCGCCTGACCGACAGCCACGGGCGTACGGTGGACTTCCGCAACACGGTGATCGTGATGACCTCCAACCTG GGCTCGGCGCAGATCCAGGAACTGGTGGGCGACCGTGAAGCCCAGCGTGCGGCGGTGATGGATGCGTTGACCACGCACTT CCGCCCGGAATTCATTAACCGGGTCGATGAAGTGGTGATCTTTGAGCCTTTGGCACGGGATCAGATTGCGGGCATCACCG AGATCCAACTGGGTCGTCTGCGTGGGCGTCTGACCGAGCGCGAGTTGTCGCTGGACCTGAGCCAGGAGGCGTTGGACAAG CTGATCGCGGTGGGTTACGACCCGGTGTATGGCGCACGGCCGTTGAAACGTGCGATCCAGCGCTGGATCGAGAACCCGTT GGCCCAGCTGATCCTGTCGGGCAGCTTTATGCCAGGGACCAGCGTTACGGCAACGGTGGAAAACGACGAAATCGTCTTCC ACTGA Protein sequence : MRIDRLTSKLQLALSDSQSLAVGLDHPAIEPAHLMQALLEQQGGSIKPLLMQVGFDVNSLRKELSKELDQLPKIQNPTGD VNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENSKLGKLLLGQGVSKKALENAINNLRGGDAVNDPNHEESRQA LDKYTVDLTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSL DMGSLIAGAKFRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYR QYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASR IRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKKRLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIE QSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLEGERDKLL KMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEK HSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL GSAQIQELVGDREAQRAAVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLTERELSLDLSQEALDK LIAVGYDPVYGARPLKRAIQRWIENPLAQLILSGSFMPGTSVTATVENDEIVFH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-151 | 44 |
