Gene Information

Name : CLJ_B3668 (CLJ_B3668)
Accession : YP_002864376.1
Strain : Clostridium botulinum 657
Genome accession: NC_012658
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 3688631 - 3689314 bp
Length : 684 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGAGTTTTTAAAAACAGAAGATTTATGCAAGGTCTACGGTAAGGGTGAAAATCAGGTTACCGCGCTTGACCATGTTTC
GCTTACAATCGAAAAAGGGGAGTTTACCGCAATCATAGGCTCCTCCGGCTCCGGCAAATCCACATTGCTTCACATCATCG
CTGGTGTGGACGTGCCGACAAGCGGAAAGGTGTATTTAGACGGGCAGGATGTATATGCCCAAAGCAATGAAAAACTCGCC
ATTTTCCGCAGGAGGCAGGTCGGACTGATTTACCAGTTTCACAACCTCATTCCCACTCTGAATGTGGTAGAAAACATCAC
CTTGCCTATACTGATGGACAAACGGAAGGTTAACGAGGAACGGCTGAATGACTTGTTGGAATTGCTTGGGCTAAAAGACC
GAAGAACGCATTTACCCAATCAGCTTTCGGGCGGTCAGCAACAGCGCGTTTCCATAGGACGCGCTTTGATGAATGCCCCG
GCGGTCATGCTTGCCGACGAGCCTACGGGCAGTTTGGACAGCCGAAATGGACATGAAATTATCAAATTGCTGAAATTAAG
CCATAAACAATATCAGCAGACCCTTATCGTCGTTACACATGACGAAAATATCGCACTGCAAGCAGACCGCATTATCGGCA
TATCCGACGGCAAAGTAGTGCGAGACGAGAGGGTGAGACCATGA

Protein sequence : 
MEFLKTEDLCKVYGKGENQVTALDHVSLTIEKGEFTAIIGSSGSGKSTLLHIIAGVDVPTSGKVYLDGQDVYAQSNEKLA
IFRRRQVGLIYQFHNLIPTLNVVENITLPILMDKRKVNEERLNDLLELLGLKDRRTHLPNQLSGGQQQRVSIGRALMNAP
AVMLADEPTGSLDSRNGHEIIKLLKLSHKQYQQTLIVVTHDENIALQADRIIGISDGKVVRDERVRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJ_B3668 YP_002864376.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 1e-50 54
CLJ_B3668 YP_002864376.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene598.p Protein 2e-47 52
CLJ_B3668 YP_002864376.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 7e-28 43
CLJ_B3668 YP_002864376.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 7e-34 42