Gene Information

Name : CLJ_B3437 (CLJ_B3437)
Accession : YP_002864173.1
Strain : Clostridium botulinum 657
Genome accession: NC_012658
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 3448617 - 3449174 bp
Length : 558 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
GTGGCTATAGTAGGGGCTAGTGGATCAGGAAAGAGTACTCTTCTTCATGTTATGGCTGGCTTGGACAAGCCTACAGGAGG
TAATATAATTATTGATAATCAAGATATATATGCTTTAGATGTAGATAGTCTTGCAGCTTTTAGAAGAAAAAGAATAGGAT
TTGTTTTTCAATTTTTTAATTTAATTCCTGTGCTAACATTAGAGGAAAATATACAACTGCCTATACTATTAGATCATGAA
AAAATAGATAAAGATTATCTAAATGAGTTATTAGATATATTAGATTTAAGAGGTAGAAGAGATCATCTTCCATCACAGCT
CTCTGGAGGGCAACAACAGCGCGCTGCTATAGCAAGGGCATTAATAAACAAACCTTCAATTATATTTGCAGATGAGCCTA
CAGGAAATCTTGATAAAAAAAATTCAAAAGAGGTAATGGATTTACTTAAATTATCCTGTAAAAAGTATAAACAAACACTA
GTTATTGTAACTCATGATTTAGAAATAGCTTCAGAAGCAGATAGGATAATTACTATATCTGATGGAGAGATTAAGTGA

Protein sequence : 
MAIVGASGSGKSTLLHVMAGLDKPTGGNIIIDNQDIYALDVDSLAAFRRKRIGFVFQFFNLIPVLTLEENIQLPILLDHE
KIDKDYLNELLDILDLRGRRDHLPSQLSGGQQQRAAIARALINKPSIIFADEPTGNLDKKNSKEVMDLLKLSCKKYKQTL
VIVTHDLEIASEADRIITISDGEIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-23 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 47
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-16 42
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 4e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJ_B3437 YP_002864173.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 3e-40 61
CLJ_B3437 YP_002864173.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene598.p Protein 2e-40 55
CLJ_B3437 YP_002864173.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 8e-24 46
CLJ_B3437 YP_002864173.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 2e-21 43