|
Name : ribD (CLJ_B3120) Accession : YP_002863876.1 Strain : Clostridium botulinum 657 Genome accession: NC_012658 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 3.5.4.26 Position : 3121488 - 3122585 bp Length : 1098 bp Strand : - Note : identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGGAAGATTATAATTTTTATATGGAAAAAACCTTAAAACTAGCTGAAAGAGGCGAGGGTAAAGTTAATCCTAATCCTAA AGTAGGAGCTATAGTAGTTAAAAACAACAAAATAATTGGAGAAGGTTATCACAAATATTTTGGAGGACCTCATGCAGAAG TTTATGCTCTTAGAGAAGCTGGTGAAAAGGCTAAAGGGGCTACTATATATGTTACATTAGAGCCCTGTTCACATTATGGT AAAACGCCTCCCTGTGCAGAGTATATAGTAAAGATGGGAATATCTAAGGCTATTATAGCTATGAAAGATCCCAATCCTTT AGTTGAAGGTAGAGGAATAGATATTTTAAAGCAAAATGGAATAGAAGTTGTAACAGAGATTATGGAAAAAGAAAGTAAAA AATTAAATGAAGTCTTTATAAAATACATAACTAAAAAGAAACCTTTTGTAGTTTTAAAAACTGCTTCTACCTTAGATGGT AAGATTGCTACAAGAACAGGAGAATCAAAATGGATAACAGGAGAAGAGGCAAGACATAAAGTACAGCAAATAAGAAATGA TTTATCCGGAATAATGGTAGGCATAGATACAGTTATAAAAGATGATCCTCTTTTAACTACAAGAATAGAAGGAGGAAGAA GTCCCAAGGCAATAATAGTAGATTCCAATCTTAGAATTCCCTTAGAATCTAAAATATTAGAAACTCTTAGCAAAAGAGCT ATTTATATAGCCACAACTAAAAAACATAAGAATCCATCAAAAAAGAATGCTTTAGAAAATTTAGGGGCTAAAGTTTTAGA GTTTGAAGAAAATCAAGAGGGAAAAGTTCCATTAAATAAATTAATGGAATATTTAGGAACAGAGGGAGTGGATAGTATTC TTTTAGAAGGAGGTAGCACATTAAATTTTTCTGCACTAAAAGAGGGGATAGTAGATAAGATCATGTGTTTTATAGCACCT AAAATAATGGGTGGACAGGATTCAAAGACGATGATAGGGGGAACTGGGATAGAAAGTTTAAAAGATATATTTAATTTACA AAACTTAAAATTTGAAAAAATAGGGCAGGATATACTTATTGAAGGCTATGTATATTAG Protein sequence : MEDYNFYMEKTLKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGPHAEVYALREAGEKAKGATIYVTLEPCSHYG KTPPCAEYIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGIEVVTEIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDG KIATRTGESKWITGEEARHKVQQIRNDLSGIMVGIDTVIKDDPLLTTRIEGGRSPKAIIVDSNLRIPLESKILETLSKRA IYIATTKKHKNPSKKNALENLGAKVLEFEENQEGKVPLNKLMEYLGTEGVDSILLEGGSTLNFSALKEGIVDKIMCFIAP KIMGGQDSKTMIGGTGIESLKDIFNLQNLKFEKIGQDILIEGYVY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 1e-58 | 42 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 1e-58 | 42 |
