Gene Information

Name : CLJ_B3105 (CLJ_B3105)
Accession : YP_002863861.1
Strain : Clostridium botulinum 657
Genome accession: NC_012658
Putative virulence/resistance : Unknown
Product : group II intron reverse transcriptase/maturase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 3104156 - 3106036 bp
Length : 1881 bp
Strand : -
Note : identified by match to protein family HMM PF00078

DNA sequence :
ATGAGTAATGAAAAGTTTAAAAATAGAAAATTTAATAAAAAGAAACAGAAACTCAGAAATAATGAGTATTATGACATGCA
AAGTATATTTGATGAATTATATAAGCAAAGTAAAGATGGAAAACAATTCAAAAATCTAATCAAAACTATAACAAGTAAAG
AAAATATTCTATTAGCATACAGAAATATCAAGAAAAATGATGGGAGCCATACAAAAGGAACTAATCATAAAACTATAAAT
GATATTGCTGGAGAAAGTGAAGATGAAATAATAGAATATGTAAGGAAAAGATTGAATAAATTTTATCCCCATAGTGTAAA
AAGAATTTATATCCCTAAAAATAATGGAGATAAAAGACCTTTAGGAATACCCACAATAGAAGATAGGCTGATACAAAGAA
GTATTTTACAAGTATTAGAGCCTATATGTGAAGCTAAATTTCACCCACATAGCTATGGTTTCAGACCAAATAGAAGTACA
GAACATGCTATAGCTAGAGCAATGACTTTAATTAATATGAACAAATTGCATTATGTGGTTGATGTGGATATAAAGGGTTT
CTTCGATAATGTTAATCATGGTAAACTTCTGAAACAATTATGGACACTTGGCATTAAAGATAAAAAGCTTATAAAAATAA
TTTCTTTAATGTTAAAGGCACAAATTAAAGATGGTAGCATGATTACAAATCCAGTAAAAGGAACTCCCCAAGGCGGTATA
ATCTCACCGTTATTAGCAAATGTAGTATTAAATGAGCTTGATTGGTGGATAAGTAGTCAATGGGAAACATTTGAAACAAA
ACATAATTACAGTAAACTTAGAACGTTTAAGAATGGCACTACAACAATAGATAAAAGTCATAAATATAGAGCATTAAGAA
ATGGTAAATTAAAAGAAATCTATATAGTGCGATATGCTGATGATTTTAAAGTGTTTTGTAAAAATCCCAAAGATGCAGAA
AAAATATTCATAGCAATAAAATTATGGTTAAAAGAAAGATTAGATTTAGAAACAAGTCCTGAAAAATCAAAAGTAACCAA
TTTAAGAAAACATCCAACAGAATTTTTAGGATTTGAACTTAAAGCAGAAAAGAAACGTAAAAAATATGTATGTCAATCTC
ATGTTTCTAAAAAGGCAAAAAGACTAATACAAGAAAAAATTAAAGCTAAAATAAAAGAATTGCAGAAGTGTCCAGCTAAA
TCAAATAATGCTAATATGTATAACTCAAGTATTCTTGGTATGCATAATTATTATAAGATAGCAACAAAAGTAAGCAATGA
TTTTCATGAAATAGCTTTTAAAGTCTCGAAGAGCCTATATATTAGATTAAAAACAACTAAAACTAAGAGTGGCAATAAAT
CTAAAGCTTTTATGAAATATTATGGAGATTATAATTATAAGATAACTTATATAAAAAATATAGCGTTATTTCCAATAGAA
GGTATTAAAACCAAAAATGCAATGCAATTTCAACAAGATATAAGTAATTATACAGTTGAAGGTAGAGCTAAAATTCATAA
AAATCTTAAAGATGTAGATATGAATATAATGCGATATCTATTGGAAAACCCAATCAAAGGAGAAACACTTCAATATAATG
ATAATAGAATCTCCTTATATGTTGGGCAAAAAGGAAAATGTGCTATTACAGGACAGAAGCTTGAAATAGGCAATATGGAA
TCACATCATAAAACATCAAGGAAACAAGGTGGAACGGATGCATATGAAAATCTAATTTTTATATTGTCAGATATTCATAA
ACTAATTCATGCTACATTACCTGAAATAATACAAAAATATATAAGGAAATTAAATCTAAATAAAGAAGCTTTGGATAAAA
TTAATAAACTTAGATTAAAAGTTGGAAATTGTGAATTATAA

Protein sequence :
MSNEKFKNRKFNKKKQKLRNNEYYDMQSIFDELYKQSKDGKQFKNLIKTITSKENILLAYRNIKKNDGSHTKGTNHKTIN
DIAGESEDEIIEYVRKRLNKFYPHSVKRIYIPKNNGDKRPLGIPTIEDRLIQRSILQVLEPICEAKFHPHSYGFRPNRST
EHAIARAMTLINMNKLHYVVDVDIKGFFDNVNHGKLLKQLWTLGIKDKKLIKIISLMLKAQIKDGSMITNPVKGTPQGGI
ISPLLANVVLNELDWWISSQWETFETKHNYSKLRTFKNGTTTIDKSHKYRALRNGKLKEIYIVRYADDFKVFCKNPKDAE
KIFIAIKLWLKERLDLETSPEKSKVTNLRKHPTEFLGFELKAEKKRKKYVCQSHVSKKAKRLIQEKIKAKIKELQKCPAK
SNNANMYNSSILGMHNYYKIATKVSNDFHEIAFKVSKSLYIRLKTTKTKSGNKSKAFMKYYGDYNYKITYIKNIALFPIE
GIKTKNAMQFQQDISNYTVEGRAKIHKNLKDVDMNIMRYLLENPIKGETLQYNDNRISLYVGQKGKCAITGQKLEIGNME
SHHKTSRKQGGTDAYENLIFILSDIHKLIHATLPEIIQKYIRKLNLNKEALDKINKLRLKVGNCEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2326 NP_815981.1 group II intron reverse transcriptase maturase Not tested Not named Protein 3e-130 51
ef0012 AAM75218.1 EF0012 Not tested Not named Protein 2e-98 43