|
Name : pdp (CLJ_B2036) Accession : YP_002862819.1 Strain : Clostridium botulinum 657 Genome accession: NC_012658 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 2022936 - 2024240 bp Length : 1305 bp Strand : - Note : identified by similarity to SP:P39142; match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644 DNA sequence : ATGAGAATGTATGATTTGATCCTAAAGAAAAGAAATGGCGGAGAGTTAAGCAAAGAAGAAATAGATTATTTTATTTTAGA ATATACTAATGGGAATGTCCCAGATTATCAAGCTTCAGCTCTTTTAATGGCTATATACTTTCAAAAAATGAAAAGAAGAG AAACTGTAGATTTGACTATGGCTATGGTTAACTCTGGAGATATATTGGATTTATCAAAAATACAGGGTATAAAAGTTGAT AAACATAGTACTGGTGGAGTTGGAGATACTACTACCTTAGTTTTGGCACCTATGGTAGCAGCTTTAGGTATACCTGTAGC TAAAATGTCTGGTAGAGGTTTAGGTCATACTGGTGGAACTATAGATAAATTAGAATCTTTTAAAGGCTTTTCAGTAAATA TGACAGAGGATAAATTTATAAATAACGTTAACAATATTAAAATAGCTGTAGGAGCTCAAACAGCAGATTTAGCTCCAGCG GATAAAAAATTATATGCATTAAGAGATGTTACTGCTACAGTAGACAATATTTCTTTAATAGCTTCTAGTATAATGAGCAA AAAAATAGCTGCAGGAGCTAATGCCATAGTTTTAGATGTAAAGGTTGGAGAAGGAGCCTTTATGAAAACTCCGGAAACTG CAAAAGATTTAGCAGAGGAAATGGTTAATATAGGTAAAAGTGTAGGTAGAAATACTGTGGCTATATTATCAGATATGGAT CAACCTTTAGGTTATGCTATAGGAAATGCTTTAGAAGTAAAAGAAGCTATAGATACACTAAAAGGAAGAGGTCCTAAGGA TTTATTAGAATTATGCTTAACATTAGGAAGTAATATGGTTATTTTATCACAAAAAGCAAATACTATAGAGGAAGCAAGAA AAATGCTTTTAAGTACTATAGAAAAAGGATTAGCTATAGAAAAATTAAAAGAATTTGTTAGATCTCAAGGCGGAGATGAT ACTTTAGTAGACAATACAGAAAAATTACCTAAGGCAGAATATATAATTCCTGTAATTTGTGATAGAAATGGATATATAAA TAAAATTCATGCCCAAAATATAGGGATAATAGCATCAGAGTTAGGAGCAGGAAGAGTTACAAAGGATAGTATTATAGATT TAGCAGTAGGTATAGTTTTAAACAAGAAAAGATCAGATAAAGTTAAAAAAGGAGATATAATAGCTTATATTCATGCTAAT GATAAAATAAAAGGAGAAAAGGCTGCAAAAGATATATTAAATAATTATGTTATAGAAGAAGAGTTAAAAGAAGAATTACC TTTAATATATGATACAGTAAAATAG Protein sequence : MRMYDLILKKRNGGELSKEEIDYFILEYTNGNVPDYQASALLMAIYFQKMKRRETVDLTMAMVNSGDILDLSKIQGIKVD KHSTGGVGDTTTLVLAPMVAALGIPVAKMSGRGLGHTGGTIDKLESFKGFSVNMTEDKFINNVNNIKIAVGAQTADLAPA DKKLYALRDVTATVDNISLIASSIMSKKIAAGANAIVLDVKVGEGAFMKTPETAKDLAEEMVNIGKSVGRNTVAILSDMD QPLGYAIGNALEVKEAIDTLKGRGPKDLLELCLTLGSNMVILSQKANTIEEARKMLLSTIEKGLAIEKLKEFVRSQGGDD TLVDNTEKLPKAEYIIPVICDRNGYINKIHAQNIGIIASELGAGRVTKDSIIDLAVGIVLNKKRSDKVKKGDIIAYIHAN DKIKGEKAAKDILNNYVIEEELKEELPLIYDTVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 3e-74 | 45 |
